RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 FADS6Q8N9I5 356 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 ZNF473Q8WTR7 871 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 TMCO6Q96DC7 493 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 BRINP2Q9C0B6 783 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 ANKZF1Q9H8Y5 726 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 ABHD10Q9NUJ1 306 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 LMBRD1Q9NUN5 540 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 FLRT3Q9NZU0 649 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 PAK5Q9P286 719 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 PHF11Q9UIL8 331 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 MCTS1Q9ULC4 181 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 PLLPQ9Y342 182 aa12.36□□□□□ -0.43
CSNK1D-213ENST00000580446 EPPK1P58107 5090 aaKnown RBP12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 SYNGR4O95473 234 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 AVPP01185 164 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 GBAP04062 536 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 CD40P25942 277 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 GSTM2P28161 218 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 DUSP2Q05923 314 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 ITGADQ13349 1161 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 PDAP1Q13442 181 aaKnown RBP12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 SLMAPQ14BN4 828 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 C17orf47Q8NEP4 570 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 OR52N5Q8NH56 324 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 EFHD2Q96C19 240 aaPredicted RBP12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 MTBPQ96DY7 904 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 JMJD8Q96S16 334 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 BPIFA3Q9BQP9 254 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 INPP5KQ9BT40 448 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 ANKRA2Q9H9E1 313 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 ZBTB26Q9HCK0 441 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 PDP1Q9P0J1 537 aaPredicted RBP12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 SPEF1Q9Y4P9 236 aa12.35□□□□□ -0.43
CSNK1D-213ENST00000580446 LOC100653049A0A140TA62 436 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 PLPP1O14494 284 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 KRT34O76011 436 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 STAMBPO95630 424 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 DHRS4L1P0CG22 281 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 ADRA2CP18825 462 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 RAP1GDS1P52306 607 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 NAP1L1P55209 391 aaKnown RBP12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 CORO7P57737 925 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 BIKQ13323 160 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 MLC1Q15049 377 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 FAHD2BQ6P2I3 314 aaPredicted RBP12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 SLC46A3Q7Z3Q1 461 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 MUCL1Q96DR8 90 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 IQCDQ96DY2 449 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 FAHD2AQ96GK7 314 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 RADILQ96JH8 1075 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 TMEM79Q9BSE2 394 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 RYDENQ9NUL5 291 aaKnown RBP12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 TRAF6Q9Y4K3 522 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 ASB4Q9Y574 426 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 AP4B1Q9Y6B7 739 aa12.34□□□□□ -0.43
CSNK1D-213ENST00000580446 OR6C70A6NIJ9 312 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 C9JVG2 144 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 LYNX1G3V0Z9 82 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 PDE5AO76074 875 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 ENO2P09104 434 aaPredicted RBP12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 LYNX1P0DP58 116 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 BMP4P12644 408 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 TMEM35AQ53FP2 167 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 TMEM201Q5SNT2 666 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 C6orf163Q5TEZ5 329 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 KHDRBS2Q5VWX1 349 aaKnown RBP12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 ZNF544Q6NX49 715 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 FAM180BQ6P0A1 224 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 TMEM108Q6UXF1 575 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 Q6ZPA2 131 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 LARP4Q71RC2 724 aaKnown RBP eCLIP12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 SRFBP1Q8NEF9 429 aaKnown RBP12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 OR52R1Q8NGF1 315 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 ZNF775Q96BV0 537 aaPredicted RBP12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 ADGRG7Q96K78 797 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 DDX47Q9H0S4 455 aaKnown RBP12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 MS4A12Q9NXJ0 267 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 VDAC3Q9Y277 283 aa12.33□□□□□ -0.44
CSNK1D-213ENST00000580446 GOLGA8QA0A0J9YX86 632 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 GOLGA8OA6NCC3 632 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 GOLGA8NF8WBI6 632 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 GOLGA8MH3BSY2 632 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 GOLGA8RI6L899 631 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 TAPBPO15533 448 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 NDUFB5O43674 189 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 CBX7O95931 251 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 TACSTD2P09758 323 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 EPORP19235 508 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 PIK3R1P27986 724 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 GALNSP34059 522 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 XKP51811 444 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 MGAT2Q10469 447 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 ZNF460Q14592 562 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 TRIP13Q15645 432 aaPredicted RBP12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 LTB4RQ15722 352 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 SWI5Q1ZZU3 235 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 ANKRD22Q5VYY1 191 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 AGGF1Q8N302 714 aaeCLIP12.32□□□□□ -0.445e-8■■■■■ 114.4
CSNK1D-213ENST00000580446 C7orf57Q8NEG2 295 aa12.32□□□□□ -0.44
CSNK1D-213ENST00000580446 OR7G1Q8NGA0 311 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms