RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 CDK9P50750 372 aaKnown RBP22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 PSMD4P55036 377 aaKnown RBP22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 MLC1Q15049 377 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 TOMM20Q15388 145 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 WLSQ5T9L3 541 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 AGBL2Q5U5Z8 902 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 FNDC7Q5VTL7 733 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 SPNS3Q6ZMD2 512 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 NUP43Q8NFH3 380 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 OR4N2Q8NGD1 307 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 OR5M9Q8NGP3 310 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 NEIL3Q8TAT5 605 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 EFHD2Q96C19 240 aaPredicted RBP22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 NTNG2Q96CW9 530 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 DTNBP1Q96EV8 351 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 SLC6A15Q9H2J7 730 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 GALNT9Q9HCQ5 603 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 EQTNQ9NQ60 294 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 THAP1Q9NVV9 213 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 ARGLU1Q9NWB6 273 aaPredicted RBP22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 COQ3Q9NZJ6 369 aa22.69■■□□□ 1.22
CDC42EP4-205ENST00000580315 A0A1W2PRB8 838 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 SNPHO15079 494 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 EMC8O43402 210 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 HPNP05981 417 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 LAMP1P11279 417 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 G6PDP11413 515 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 TRPC1P48995 793 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 PRKAG1P54619 331 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 PRR5P85299 388 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 GAB1Q13480 694 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 EMC4Q5J8M3 183 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 KRTCAP2Q8N6L1 136 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 MS4A4EQ96PG1 132 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 NUF2Q9BZD4 464 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 UBQLN3Q9H347 655 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 PNPLA3Q9NST1 481 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 PNPOQ9NVS9 261 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 NTMQ9P121 344 aa22.68■■□□□ 1.22
CDC42EP4-205ENST00000580315 KCNH1O95259 989 aa22.67■■□□□ 1.22
CDC42EP4-205ENST00000580315 PTPN6P29350 595 aa22.67■■□□□ 1.22
CDC42EP4-205ENST00000580315 PTGDSP41222 190 aa22.67■■□□□ 1.22
CDC42EP4-205ENST00000580315 LSM12Q3MHD2 195 aaKnown RBP22.67■■□□□ 1.22
CDC42EP4-205ENST00000580315 ZNF585AQ6P3V2 769 aa22.67■■□□□ 1.22
CDC42EP4-205ENST00000580315 WDR53Q7Z5U6 358 aaPredicted RBP22.67■■□□□ 1.22
CDC42EP4-205ENST00000580315 LRRC34Q8IZ02 419 aa22.67■■□□□ 1.22
CDC42EP4-205ENST00000580315 CDRT4Q8N9R6 151 aa22.67■■□□□ 1.22
CDC42EP4-205ENST00000580315 OR5P2Q8WZ92 322 aa22.67■■□□□ 1.22
CDC42EP4-205ENST00000580315 BHLHE41Q9C0J9 482 aaPredicted RBP22.67■■□□□ 1.22
CDC42EP4-205ENST00000580315 SPRR3Q9UBC9 169 aa22.67■■□□□ 1.22
CDC42EP4-205ENST00000580315 TNFRSF10DQ9UBN6 386 aa22.67■■□□□ 1.22
CDC42EP4-205ENST00000580315 HRH3Q9Y5N1 445 aa22.67■■□□□ 1.22
CDC42EP4-205ENST00000580315 MED13LQ71F56 2210 aa22.67■■□□□ 1.22
CDC42EP4-205ENST00000580315 C15orf38-AP3S2A0A0A6YYH1 394 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 C2orf72A6NCS6 295 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 WDR1O75083 606 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 CBR3O75828 277 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 CYP4B1P13584 511 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 EFNA1P20827 205 aaPredicted RBP22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 ACVR2AP27037 513 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 GABRA3P34903 492 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 CLDN8P56748 225 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 C21orf58P58505 322 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 ACAD11Q709F0 780 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 RIMKLAQ8IXN7 391 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 MARVELD2Q8N4S9 558 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 GPR151Q8TDV0 419 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 COQ8BQ96D53 544 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 MANSC1Q9H8J5 431 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 MEAF6Q9HAF1 191 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 WIF1Q9Y5W5 379 aa22.66■■□□□ 1.22
CDC42EP4-205ENST00000580315 SNNO75324 88 aaPredicted RBP22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 IL33O95760 270 aa22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 HOXD4P09016 255 aaPredicted RBP22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 LBPP18428 481 aa22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 ENDOUP21128 410 aaKnown RBP22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 GCKP35557 465 aa22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 CLK3P49761 638 aaKnown RBP22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 ZCCHC12Q6PEW1 402 aa22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 PLCZ1Q86YW0 608 aa22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 SLC9A6Q92581 669 aa22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 DUSP26Q9BV47 211 aa22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 SERHLQ9NQF3 203 aa22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 ZCCHC3Q9NUD5 404 aaKnown RBP22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 ABCG2Q9UNQ0 655 aa22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 PCDHGB3Q9Y5G1 929 aa22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 SNX8Q9Y5X2 465 aa22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 SPG11Q96JI7 2443 aa22.65■■□□□ 1.22
CDC42EP4-205ENST00000580315 NKX2-2O95096 273 aa22.64■■□□□ 1.21
CDC42EP4-205ENST00000580315 GABRA1P14867 456 aa22.64■■□□□ 1.21
CDC42EP4-205ENST00000580315 EVI2BP34910 448 aa22.64■■□□□ 1.21
CDC42EP4-205ENST00000580315 RFX3P48380 749 aa22.64■■□□□ 1.21
CDC42EP4-205ENST00000580315 PRIM2P49643 509 aa22.64■■□□□ 1.21
CDC42EP4-205ENST00000580315 DIO3P55073 304 aa22.64■■□□□ 1.21
CDC42EP4-205ENST00000580315 PGS1Q32NB8 556 aa22.64■■□□□ 1.21
CDC42EP4-205ENST00000580315 SPDYE7PQ495Y7 208 aa22.64■■□□□ 1.21
CDC42EP4-205ENST00000580315 MFSD12Q6NUT3 480 aa22.64■■□□□ 1.21
CDC42EP4-205ENST00000580315 GOLGA6L1Q8N7Z2 621 aa22.64■■□□□ 1.21
CDC42EP4-205ENST00000580315 WDSUB1Q8N9V3 476 aa22.64■■□□□ 1.21
CDC42EP4-205ENST00000580315 RND1Q92730 232 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms