RNA–Protein interactions for RNA: ENST00000580288.2

STRADA-215, Transcript of STE20-related kinase adaptor alpha, human

TSL 5

Gene STRADA, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-215	ENST00000580288		B4DXG7	233 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	UBFD1	O14562	309 aa	Known RBP	13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	ZIC3	O60481	467 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	CRCP	O75575	148 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	RSL1D1	O76021	490 aa	Known RBP	13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	ATE1	O95260	518 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	CRH	P06850	196 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	CPOX	P36551	454 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	FOXD4	Q12950	439 aa	Predicted RBP	13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	SLC29A2	Q14542	456 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	GANAB	Q14697	944 aa	Known RBP	13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	DECR1	Q16698	335 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	KRTAP21-3	Q3LHN1	58 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	CYP27C1	Q4G0S4	372 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	SH2D4B	Q5SQS7	431 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	RAET1L	Q5VY80	246 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	OR2A2	Q6IF42	318 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	FAM71E1	Q6IPT2	247 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	TMEM107	Q6UX40	140 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	FRMD7	Q6ZUT3	714 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	IKBIP	Q70UQ0	350 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	CHMP1B	Q7LBR1	199 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	P4HA3	Q7Z4N8	544 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	FADS6	Q8N9I5	356 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	FAM76A	Q8TAV0	307 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	SMPDL3B	Q92485	455 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	TXLNGY	Q9BZA5	131 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	PLEKHF2	Q9H8W4	249 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288		Q9N2J8	555 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	TAS2R7	Q9NYW3	318 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	EMCN	Q9ULC0	261 aa		13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	WBP11	Q9Y2W2	641 aa	Known RBP	13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	POLR3H	Q9Y535	204 aa	Predicted RBP	13.73	□□□□□ -0.21
STRADA-215	ENST00000580288	MED12L	Q86YW9	2145 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288		A0A1W2PNV4	684 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	SLC22A20	A6NK97	555 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	C17orf51	A8MQB3	221 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288		A8MXE2	369 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288		G3V2L1	256 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	MSTN	O14793	375 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	TNFSF13	O75888	250 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	PSMG1	O95456	288 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	TGM6	O95932	706 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	HRG	P04196	525 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	FAM153B	P0C7A2	387 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	PEPD	P12955	493 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	B3GALT5-AS1	P59052	145 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	ZNHIT3	Q15649	155 aa	Predicted RBP	13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	DEFB113	Q30KQ7	82 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	FAM153C	Q494X1	144 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	TRIM46	Q7Z4K8	759 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	UBQLNL	Q8IYU4	475 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	OR2L13	Q8N349	312 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	MEIOB	Q8N635	442 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	OR2M3	Q8NG83	312 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	KIF18A	Q8NI77	898 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	DSN1	Q9H410	356 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	GLIPR2	Q9H4G4	154 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	SDHAF3	Q9NRP4	125 aa		13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	FAM120C	Q9NX05	1096 aa	Known RBP	13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	MRTO4	Q9UKD2	239 aa	Known RBP	13.72	□□□□□ -0.21
STRADA-215	ENST00000580288	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	LINC01387	J3KSC0	135 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	UPK1A	O00322	258 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	FADS1	O60427	444 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	PROC	P04070	461 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	IFI6	P09912	130 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	HK1	P19367	917 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	PSMD4	P55036	377 aa	Known RBP	13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	EEFSEC	P57772	596 aa	Known RBP	13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	STX5	Q13190	355 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	POU4F3	Q15319	338 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	PRSS53	Q2L4Q9	553 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	CCDC153	Q494R4	210 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	CFAP157	Q5JU67	520 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	POM121	Q96HA1	1249 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	AMDHD1	Q96NU7	426 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	PTGES2	Q9H7Z7	377 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	NDRG3	Q9UGV2	375 aa		13.71	□□□□□ -0.21
STRADA-215	ENST00000580288	TTC36	A6NLP5	189 aa		13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	CASK	O14936	926 aa		13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	IL33	O95760	270 aa		13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	PCYT1A	P49585	367 aa		13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	CLK3	P49761	638 aa	Known RBP	13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	DNAJB13	P59910	316 aa		13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	ADAM8	P78325	824 aa		13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	NOXRED1	Q6NXP6	359 aa		13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	CNEP1R1	Q8N9A8	125 aa		13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	ELP4	Q96EB1	424 aa		13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	METTL2A	Q96IZ6	378 aa	Known RBP	13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	RHOXF2	Q9BQY4	288 aa		13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	LMF2	Q9BU23	707 aa	Known RBP	13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	C3orf14	Q9HBI5	128 aa		13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	DLL4	Q9NR61	685 aa		13.7	□□□□□ -0.22
STRADA-215	ENST00000580288	FLRT3	Q9NZU0	649 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms