RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 PRPF19Q9UMS4 504 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-212ENST00000580061 USP22Q9UPT9 525 aa14.65□□□□□ -0.06
CSNK1D-212ENST00000580061 PCDHGA9Q9Y5G4 932 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-212ENST00000580061 EML6Q6ZMW3 1958 aa14.65□□□□□ -0.06
CSNK1D-212ENST00000580061 PRORSD1PA6NEY8 169 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 OR6C70A6NIJ9 312 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 SLC28A2O43868 658 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 DNAJA2O60884 412 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 REM1O75628 298 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 BCHEP06276 602 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 GUSBP08236 651 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 NR2F1P10589 423 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 TMED10P49755 219 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 GSK3BP49841 420 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 PNLIPRP2P54317 469 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 PSMD4P55036 377 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 NCALDP61601 193 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 CDK6Q00534 326 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 NTRK2Q16620 822 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 ZNF791Q3KP31 576 aaPredicted RBP14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 GPAT3Q53EU6 434 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 SAMD4BQ5PRF9 694 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 ZNF468Q5VIY5 522 aaPredicted RBP14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 IGFL2Q6UWQ7 119 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 IL20RBQ6UXL0 311 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 LRRC74BQ6ZQY2 392 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 OLIG3Q7RTU3 272 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 ZAR1Q86SH2 424 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 GALNT10Q86SR1 603 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 GPALPP1Q8IXQ4 340 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 DND1Q8IYX4 353 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 ARHGAP24Q8N264 748 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 METTL25Q8N6Q8 603 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 NFKBIDQ8NI38 313 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 SPACA9Q96E40 222 aaPredicted RBP14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 TMEM19Q96HH6 336 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 TRNT1Q96Q11 434 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 ADOQ96SZ5 270 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 SMAD5Q99717 465 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 G6PC3Q9BUM1 346 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 ZNF350Q9GZX5 532 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 RUBCNLQ9H714 662 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 ZBTB20Q9HC78 741 aaPredicted RBP14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 GMPR2Q9P2T1 348 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 CD300AQ9UGN4 299 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 PACSIN3Q9UKS6 424 aa14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 MAP1BP46821 2468 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-212ENST00000580061 TMEM247A6NEH6 219 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 FCMRO60667 390 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 ABCB7O75027 752 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 UGT2B11O75310 529 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 STX11O75558 287 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 ZIC2O95409 532 aaPredicted RBP14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 H6PDO95479 791 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 WDPCPO95876 746 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 CHRM4P08173 479 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 IL12BP29460 328 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 RFX3P48380 749 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 HLCSP50747 726 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 CRISP3P54108 245 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 POLE2P56282 527 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 FBXW4P57775 412 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 SCARB2Q14108 478 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 GNA13Q14344 377 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 ZSCAN26Q16670 478 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 ZNF630Q2M218 657 aaPredicted RBP14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 VMACQ2NL98 169 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 SPATS1Q496A3 300 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 AP1ARQ63HQ0 302 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 DESI1Q6ICB0 168 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 TYW3Q6IPR3 259 aaKnown RBP14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 ERICH5Q6P6B1 374 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 NUP54Q7Z3B4 507 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 YTHDF3Q7Z739 585 aaKnown RBP14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 IFNEQ86WN2 208 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 RNF148Q8N7C7 305 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 C11orf65Q8NCR3 313 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 OR2T12Q8NG77 320 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 COL21A1Q96P44 957 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 THTPAQ9BU02 230 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 RNF32Q9H0A6 362 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 SAP130Q9H0E3 1048 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 SLC38A1Q9H2H9 487 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 LRMDAQ9H2I8 198 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 TRIM45Q9H8W5 580 aaPredicted RBP14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 POLE3Q9NRF9 147 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 HPF1Q9NWY4 346 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 ANKRD10Q9NXR5 420 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 WDR45Q9Y484 360 aa14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.63□□□□□ -0.07
CSNK1D-212ENST00000580061 TPRP12270 2363 aaKnown RBP14.62□□□□□ -0.07
CSNK1D-212ENST00000580061 ELOVL7A1L3X0 281 aa14.62□□□□□ -0.07
CSNK1D-212ENST00000580061 MKRN2OSH3BPM6 223 aa14.62□□□□□ -0.07
CSNK1D-212ENST00000580061 GSC2O15499 205 aa14.62□□□□□ -0.07
CSNK1D-212ENST00000580061 DNAJC8O75937 253 aaPredicted RBP14.62□□□□□ -0.07
CSNK1D-212ENST00000580061 F10P00742 488 aa14.62□□□□□ -0.07
CSNK1D-212ENST00000580061 CYP4B1P13584 511 aa14.62□□□□□ -0.07
CSNK1D-212ENST00000580061 HSD17B1P14061 328 aa14.62□□□□□ -0.07
CSNK1D-212ENST00000580061 ATP6V1C1P21283 382 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms