RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 FBXW4P57775 412 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 KCNJ2P63252 427 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 PLCXD2Q0VAA5 305 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 CPTPQ5TA50 214 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 PRAMEF20Q5VT98 475 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 WDR53Q7Z5U6 358 aaPredicted RBP14.64□□□□□ -0.07
VAPA-204ENST00000577901 TGIF2LYQ8IUE0 185 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 LRRC34Q8IZ02 419 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 PRR22Q8IZ63 422 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 CIDECQ96AQ7 238 aaPredicted RBP14.64□□□□□ -0.07
VAPA-204ENST00000577901 OMA1Q96E52 524 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 BTBD9Q96Q07 612 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 NUF2Q9BZD4 464 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 FOLH1BQ9HBA9 442 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 ACSS1Q9NUB1 689 aaPredicted RBP14.64□□□□□ -0.07
VAPA-204ENST00000577901 SPRR3Q9UBC9 169 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 ST6GALNAC2Q9UJ37 374 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 BOKQ9UMX3 212 aaPredicted RBP14.64□□□□□ -0.07
VAPA-204ENST00000577901 MAPRE3Q9UPY8 281 aa14.64□□□□□ -0.07
VAPA-204ENST00000577901 SPG11Q96JI7 2443 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 HMGB1P1B2RPK0 211 aaPredicted RBP14.63□□□□□ -0.07
VAPA-204ENST00000577901 UPK1AO00322 258 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 SNNO75324 88 aaPredicted RBP14.63□□□□□ -0.07
VAPA-204ENST00000577901 SNX4O95219 450 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 ABCB1P08183 1280 aaPredicted RBP14.63□□□□□ -0.07
VAPA-204ENST00000577901 G6PDP11413 515 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 ENDOUP21128 410 aaKnown RBP14.63□□□□□ -0.07
VAPA-204ENST00000577901 KRT20P35900 424 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 KIR2DL3P43628 341 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 HSPB3Q12988 150 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 SNTB1Q13884 538 aaKnown RBP14.63□□□□□ -0.07
VAPA-204ENST00000577901 PTGR1Q14914 329 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 ZNF385BQ569K4 471 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 RIPPLY2Q5TAB7 128 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 TMEM198Q66K66 360 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 ZNF551Q7Z340 670 aaPredicted RBP14.63□□□□□ -0.07
VAPA-204ENST00000577901 OR2L13Q8N349 312 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 SPPL2AQ8TCT8 520 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 VSTM2LQ96N03 204 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 SH3GL2Q99962 352 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 DOHHQ9BU89 302 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 CLEC4MQ9H2X3 399 aaPredicted RBP14.63□□□□□ -0.07
VAPA-204ENST00000577901 LIME1Q9H400 295 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 MEAF6Q9HAF1 191 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 ASIC5Q9NY37 505 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 B4GALT7Q9UBV7 327 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 CNOT11Q9UKZ1 510 aaKnown RBP14.63□□□□□ -0.07
VAPA-204ENST00000577901 ZNF407Q9C0G0 2248 aa14.63□□□□□ -0.07
VAPA-204ENST00000577901 TRPC5OSA6NMA1 111 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 KLF11O14901 512 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 HDAC3O15379 428 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 REM1O75628 298 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 RFPL3SP0C7P2 107 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 CT45A8P0DMV1 189 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 CT45A9P0DMV2 189 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 LBPP18428 481 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 KLK2P20151 261 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 UQCRC1P31930 480 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 FRKP42685 505 aaPredicted RBP14.62□□□□□ -0.07
VAPA-204ENST00000577901 CLDN8P56748 225 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 PPP2R2AP63151 447 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 ZNF155Q12901 538 aaPredicted RBP14.62□□□□□ -0.07
VAPA-204ENST00000577901 MLC1Q15049 377 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 ZNHIT3Q15649 155 aaPredicted RBP14.62□□□□□ -0.07
VAPA-204ENST00000577901 TTMPQ5BVD1 217 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 CT45A2Q5DJT8 189 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 PACS2Q86VP3 889 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 SLC44A2Q8IWA5 706 aaPredicted RBP14.62□□□□□ -0.07
VAPA-204ENST00000577901 OR7A2PQ8NGA2 310 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 CEP70Q8NHQ1 597 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 TMBIM1Q969X1 311 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 COQ8BQ96D53 544 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 TMCO6Q96DC7 493 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 RMND5BQ96G75 393 aaPredicted RBP14.62□□□□□ -0.07
VAPA-204ENST00000577901 JSRP1Q96MG2 331 aaPredicted RBP14.62□□□□□ -0.07
VAPA-204ENST00000577901 COL21A1Q96P44 957 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 GPATCH1Q9BRR8 931 aaKnown RBP14.62□□□□□ -0.07
VAPA-204ENST00000577901 ZNF703Q9H7S9 590 aaPredicted RBP14.62□□□□□ -0.07
VAPA-204ENST00000577901 C3orf14Q9HBI5 128 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 ZFP64Q9NPA5 681 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 OR10H1Q9Y4A9 318 aa14.62□□□□□ -0.07
VAPA-204ENST00000577901 A0A1W2PRB8 838 aa14.61□□□□□ -0.07
VAPA-204ENST00000577901 OR6C70A6NIJ9 312 aa14.61□□□□□ -0.07
VAPA-204ENST00000577901 TTC36A6NLP5 189 aa14.61□□□□□ -0.07
VAPA-204ENST00000577901 NME6O75414 186 aaPredicted RBP14.61□□□□□ -0.07
VAPA-204ENST00000577901 KITP10721 976 aa14.61□□□□□ -0.07
VAPA-204ENST00000577901 LAMP1P11279 417 aa14.61□□□□□ -0.07
VAPA-204ENST00000577901 HOXB4P17483 251 aaPredicted RBP14.61□□□□□ -0.07
VAPA-204ENST00000577901 CASP3P42574 277 aa14.61□□□□□ -0.07
VAPA-204ENST00000577901 CORO7P57737 925 aa14.61□□□□□ -0.07
VAPA-204ENST00000577901 MRPS22P82650 360 aaKnown RBP14.61□□□□□ -0.07
VAPA-204ENST00000577901 LSM12Q3MHD2 195 aaKnown RBP14.61□□□□□ -0.07
VAPA-204ENST00000577901 ZNF75CPQ92670 426 aaPredicted RBP14.61□□□□□ -0.07
VAPA-204ENST00000577901 ANGPTL4Q9BY76 406 aa14.61□□□□□ -0.07
VAPA-204ENST00000577901 METTL7AQ9H8H3 244 aa14.61□□□□□ -0.07
VAPA-204ENST00000577901 PROK2Q9HC23 129 aa14.61□□□□□ -0.07
VAPA-204ENST00000577901 Q9N2J8 555 aa14.61□□□□□ -0.07
VAPA-204ENST00000577901 RASSF1Q9NS23 344 aa14.61□□□□□ -0.07
VAPA-204ENST00000577901 CRIM1Q9NZV1 1036 aa14.61□□□□□ -0.07
VAPA-204ENST00000577901 MRTO4Q9UKD2 239 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms