RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 XPO1O14980 1071 aaKnown RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 TYROBPO43914 113 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 CRLF1O75462 422 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 TM7SF2O76062 418 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 KIAA0754O94854 1291 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 ECDO95905 644 aaPredicted RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 UGT2B4P06133 528 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 ANXA4P09525 319 aaPredicted RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 CCDC159P0C7I6 412 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 H2AFXP16104 143 aaPredicted RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 SELEP16581 610 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 CAPN2P17655 700 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 GLRA2P23416 452 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 VCPP55072 806 aaKnown RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 UBE2HP62256 183 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 CHIT1Q13231 466 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 EXOSC2Q13868 293 aaKnown RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 EIF2B1Q14232 305 aaKnown RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 ABRAXAS2Q15018 415 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 PDK4Q16654 411 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 TPD52L1Q16890 204 aaPredicted RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 ZNF528Q3MIS6 628 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 SLC36A3Q495N2 470 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 ACSF3Q4G176 576 aaPredicted RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 C14orf28Q4W4Y0 310 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 CYBRD1Q53TN4 286 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 TCTEX1D4Q5JR98 221 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 DCST2Q5T1A1 773 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 CCDC183Q5T5S1 534 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 MEDAGQ5VYS4 303 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 WDR25Q64LD2 544 aaPredicted RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 CENPPQ6IPU0 288 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 C2orf66Q6UXQ4 117 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 TIPARPQ7Z3E1 657 aaKnown RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 P4HA3Q7Z4N8 544 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 FADS6Q8N9I5 356 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 ZNF397Q8NF99 534 aaPredicted RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 PNPT1Q8TCS8 783 aaKnown RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 VN1R17PQ8TDU5 208 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 ITLN1Q8WWA0 313 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 SHC3Q92529 594 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 BIRC7Q96CA5 298 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 HPDLQ96IR7 371 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 ACCSQ96QU6 501 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 TTYH2Q9BSA4 534 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 CCDC28BQ9BUN5 200 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 ST6GALNAC5Q9BVH7 336 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 GON7Q9BXV9 100 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 GSDMCQ9BYG8 508 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 VCX2Q9H322 139 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 RHOJQ9H4E5 214 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 KAT8Q9H7Z6 458 aaKnown RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 WDR76Q9H967 626 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 CALHM2Q9HA72 323 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 IL1RL2Q9HB29 575 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 TIGARQ9NQ88 270 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 SMPD3Q9NY59 655 aaPredicted RBP1.99□□□□□ -2.09
COPS3-213ENST00000577210 TAS2R16Q9NYV7 291 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 KLRF1Q9NZS2 232 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 DPM3Q9P2X0 92 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 GALPQ9UBC7 116 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 MIOXQ9UGB7 285 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 IKZF3Q9UKT9 509 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 FOXJ3Q9UPW0 622 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 STYXL1Q9Y6J8 313 aa1.99□□□□□ -2.09
COPS3-213ENST00000577210 OBSCNQ5VST9 7968 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 A0A087WWV3 80 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 GSAPA4D1B5 854 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 LRIT2A6NDA9 550 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 MFSD2BA6NFX1 497 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 ERI2A8K979 691 aaKnown RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 A8MUI8 341 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 H0YL77 283 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 K7EQM0 130 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 UBXN8O00124 270 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 IMPA2O14732 288 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 CASKO14936 926 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 MAGEB3O15480 346 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 LRRTM2O43300 516 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 OR1F1O43749 312 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 LCMT2O60294 686 aaKnown RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 RANBP6O60518 1105 aaKnown RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 RAMP1O60894 148 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 RHBDL1O75783 438 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 STK17BO94768 372 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 NDUFA7O95182 113 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 SEMA4FO95754 770 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 PIGRP01833 764 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 CSF2P04141 144 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 MELTFP08582 738 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 FOLR2P14207 255 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 PVRP15151 417 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 UCP1P25874 307 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 DPP4P27487 766 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 PTPN6P29350 595 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 AXLP30530 894 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 SAA4P35542 130 aa1.98□□□□□ -2.09
COPS3-213ENST00000577210 CYLC1P35663 651 aaPredicted RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 CHI3L1P36222 383 aaPredicted RBP1.98□□□□□ -2.09
COPS3-213ENST00000577210 TAGLN2P37802 199 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms