RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 FOXO6A8MYZ6 492 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 PPP6CO00743 305 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 WDR1O75083 606 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 TRIM3O75382 744 aaPredicted RBP5.68□□□□□ -1.5
NUP88-212ENST00000576708 NME6O75414 186 aaPredicted RBP5.68□□□□□ -1.5
NUP88-212ENST00000576708 TRAPPC6AO75865 159 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 KLHL2O95198 593 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 ZWINTO95229 277 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 CLDN9O95484 217 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 ALDOAP04075 364 aaKnown RBP5.68□□□□□ -1.5
NUP88-212ENST00000576708 SLC35E2P0CK97 266 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 NT5EP21589 574 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 SERPINB3P29508 390 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 TYK2P29597 1187 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 UQCRC1P31930 480 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 BUD31P41223 144 aaPredicted RBP5.68□□□□□ -1.5
NUP88-212ENST00000576708 SERPINB8P50452 374 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 XKP51811 444 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 IST1P53990 364 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 ALDH18A1P54886 795 aaKnown RBP5.68□□□□□ -1.5
NUP88-212ENST00000576708 CAV1Q03135 178 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 ROM1Q03395 351 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 DUSP2Q05923 314 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 CRYZQ08257 329 aaKnown RBP5.68□□□□□ -1.5
NUP88-212ENST00000576708 DUSP8Q13202 625 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 CUL3Q13618 768 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 ACAP2Q15057 778 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 PCBP2Q15366 365 aaKnown RBP eCLIP5.68□□□□□ -1.5
NUP88-212ENST00000576708 NTRK2Q16620 822 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 FAM83EQ2M2I3 478 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 EIPR1Q53HC9 387 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 DCST1Q5T197 706 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 RIPPLY2Q5TAB7 128 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 FNDC7Q5VTL7 733 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 CES4AQ5XG92 561 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 OR52E8Q6IFG1 317 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 FAM111BQ6SJ93 734 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 ARSKQ6UWY0 536 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 PLXDC2Q6UX71 529 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 SPNS3Q6ZMD2 512 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 NUDT13Q86X67 352 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 CMIPQ8IY22 773 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 CLYBLQ8N0X4 340 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 LIX1Q8N485 282 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 SLC15A4Q8N697 577 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 ZNF615Q8N8J6 731 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 L3MBTL4Q8NA19 623 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 OR4K14Q8NGD5 310 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 RHEBL1Q8TAI7 183 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 NEIL3Q8TAT5 605 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 SPPL2AQ8TCT8 520 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 ATP6V1E2Q96A05 226 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 ADIPOR1Q96A54 375 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 ART5Q96L15 291 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 RILPQ96NA2 401 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 GNRHR2Q96P88 292 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 GPATCH1Q9BRR8 931 aaKnown RBP5.68□□□□□ -1.5
NUP88-212ENST00000576708 CENPKQ9BS16 269 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 MRPL1Q9BYD6 325 aaKnown RBP5.68□□□□□ -1.5
NUP88-212ENST00000576708 KRTAP4-11Q9BYQ6 195 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 RAB17Q9H0T7 212 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 ACKR4Q9NPB9 350 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 FARSBQ9NSD9 589 aaKnown RBP5.68□□□□□ -1.5
NUP88-212ENST00000576708 CCM2LQ9NUG4 571 aaPredicted RBP5.68□□□□□ -1.5
NUP88-212ENST00000576708 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.68□□□□□ -1.5
NUP88-212ENST00000576708 MS4A12Q9NXJ0 267 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 CNIH4Q9P003 139 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 PCTPQ9UKL6 214 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 DTX4Q9Y2E6 619 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 TSC22D4Q9Y3Q8 395 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.68□□□□□ -1.5
NUP88-212ENST00000576708 F8P00451 2351 aa5.68□□□□□ -1.5
NUP88-212ENST00000576708 PHF3Q92576 2039 aaKnown RBP5.68□□□□□ -1.5
NUP88-212ENST00000576708 OR6C76A6NM76 312 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 FOXE1O00358 373 aaPredicted RBP5.67□□□□□ -1.5
NUP88-212ENST00000576708 CTAG2O75638 210 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 KRT38O76015 456 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 EPPINO95925 133 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 CLEC2LP0C7M8 214 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 CPMP14384 443 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 GABRA1P14867 456 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 S1PR1P21453 382 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 BMP5P22003 454 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 GPX3P22352 226 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 APEX1P27695 318 aaKnown RBP5.67□□□□□ -1.5
NUP88-212ENST00000576708 PIK3R1P27986 724 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 FEN1P39748 380 aaKnown RBP5.67□□□□□ -1.5
NUP88-212ENST00000576708 CASP3P42574 277 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 KIR2DL3P43628 341 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 CDK9P50750 372 aaKnown RBP5.67□□□□□ -1.5
NUP88-212ENST00000576708 CCNG1P51959 295 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 CDH13P55290 713 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 PHC1P78364 1004 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 PHEXP78562 749 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 MGAT2Q10469 447 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 FUT7Q11130 342 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 TRAF3Q13114 568 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 BIKQ13323 160 aa5.67□□□□□ -1.5
NUP88-212ENST00000576708 NAB1Q13506 487 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms