RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 GPR75O95800 540 aa22.06■■□□□ 1.12
NPLOC4-217ENST00000574897 DBTP11182 482 aaKnown RBP22.06■■□□□ 1.12
NPLOC4-217ENST00000574897 PCYT1AP49585 367 aa22.06■■□□□ 1.12
NPLOC4-217ENST00000574897 CDK5Q00535 292 aa22.06■■□□□ 1.12
NPLOC4-217ENST00000574897 MFSD4BQ5TF39 518 aa22.06■■□□□ 1.12
NPLOC4-217ENST00000574897 MAT2BQ9NZL9 334 aa22.06■■□□□ 1.12
NPLOC4-217ENST00000574897 KCNE5Q9UJ90 142 aa22.06■■□□□ 1.12
NPLOC4-217ENST00000574897 ATP1B1P05026 303 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 SRFP11831 508 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 PRG2P13727 222 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 CDH3P22223 829 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 RELAQ04206 551 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 MGAT2Q10469 447 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 PRICKLE4Q2TBC4 344 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 FIGNL1Q6PIW4 674 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 ZNF655Q8N720 491 aaPredicted RBP22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 TMEM255BQ8WV15 326 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 VMP1Q96GC9 406 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 CRELD1Q96HD1 420 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 MTHFD2LQ9H903 347 aaPredicted RBP22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 KLHL28Q9NXS3 571 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 GPR52Q9Y2T5 361 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 SLC9B1P1A6NJY1 282 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 CLDN25C9JDP6 229 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 PEX12O00623 359 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 APOL3O95236 402 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 ATXN8OSP0DMR3 200 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 BMP4P12644 408 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 RPS3AP61247 264 aaKnown RBP22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 ST3GAL3Q11203 375 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 ITGADQ13349 1161 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 NDUFA9Q16795 377 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 CLEC12AQ5QGZ9 265 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 ARMC6Q6NXE6 501 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 ZNF367Q7RTV3 350 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 GDF7Q7Z4P5 450 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 ANKRD9Q96BM1 317 aaPredicted RBP22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 PIGUQ9H490 435 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 GALNT8Q9NY28 637 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 SPAG17Q6Q759 2223 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 VCANP13611 3396 aa22.05■■□□□ 1.12
NPLOC4-217ENST00000574897 AP3D1O14617 1153 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 RPLP0P05388 317 aaKnown RBP22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 PIPP12273 146 aaPredicted RBP22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 GPR4P46093 362 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 OMPP47874 163 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 SYT14P1Q58G82 188 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 DCST2Q5T1A1 773 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 ZC3H14Q6PJT7 736 aaKnown RBP22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 PEX5LQ8IYB4 626 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 SLC34A3Q8N130 599 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 OR6Q1Q8NGQ2 317 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 C9orf43Q8TAL5 461 aaPredicted RBP22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 LRR1Q96L50 414 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 Q96MT0 163 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 PHOX2BQ99453 314 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 POLDIP3Q9BY77 421 aaKnown RBP22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 SEMA6CQ9H3T2 930 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 SPACA6W5XKT8 324 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 CEP192Q8TEP8 1941 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 GKN3PP0CG01 181 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 SSX1Q16384 188 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 Q6ZNX1 250 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 LINC00471Q8N535 108 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 FGF11Q92914 225 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 SLC41A3Q96GZ6 507 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 PHF7Q9BWX1 381 aaPredicted RBP22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 SAP130Q9H0E3 1048 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 ETAA1Q9NY74 926 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 PCDHGA3Q9Y5H0 932 aa22.04■■□□□ 1.12
NPLOC4-217ENST00000574897 GXYLT2A0PJZ3 443 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 OR2W5A6NFC9 320 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 BMP8BP34820 402 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 ZNF136P52737 540 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 EEF1A1P68104 462 aaKnown RBP22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 SNAPC1Q16533 368 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 ZAR1Q86SH2 424 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 GALNT12Q8IXK2 581 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 NRMQ8IXM6 262 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 ZNF687Q8N1G0 1237 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 MFSD4AQ8N468 514 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 C19orf47Q8N9M1 422 aaKnown RBP22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 GNPDA2Q8TDQ7 276 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 ZNF350Q9GZX5 532 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 IL20RAQ9UHF4 553 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 A0A0A6YYC8 382 aaPredicted RBP22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 AGAP5A6NIR3 686 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 I3L1I5 382 aaPredicted RBP22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 ARHGAP33O14559 1287 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 CSO75390 466 aaKnown RBP22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 SOX3P41225 446 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 SMAD4Q13485 552 aaKnown RBP22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 ATP1A4Q13733 1029 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 OCLNQ16625 522 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 ARHGEF39Q8N4T4 335 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 COX18Q8N8Q8 333 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 GPR151Q8TDV0 419 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 TMEM80Q96HE8 168 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 OPALINQ96PE5 141 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 HCN3Q9P1Z3 774 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms