RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 FLRT3Q9NZU0 649 aa13.76□□□□□ -0.21
CTNS-209ENST00000574776 MED11Q9P086 117 aa13.76□□□□□ -0.21
CTNS-209ENST00000574776 PPP4R1LQ9P1A2 415 aa13.76□□□□□ -0.21
CTNS-209ENST00000574776 NDRG3Q9UGV2 375 aa13.76□□□□□ -0.21
CTNS-209ENST00000574776 PACSIN3Q9UKS6 424 aa13.76□□□□□ -0.21
CTNS-209ENST00000574776 STK38LQ9Y2H1 464 aa13.76□□□□□ -0.21
CTNS-209ENST00000574776 VPS13CQ709C8 3753 aa13.76□□□□□ -0.21
CTNS-209ENST00000574776 SERTM1A2A2V5 107 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 UBFD1O14562 309 aaKnown RBP13.75□□□□□ -0.21
CTNS-209ENST00000574776 HCRTR2O43614 444 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 FADS1O60427 444 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 SMNDC1O75940 238 aaKnown RBP eCLIP13.75□□□□□ -0.21
CTNS-209ENST00000574776 PYGBP11216 843 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 PEPDP12955 493 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 HK1P19367 917 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 CD53P19397 219 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 HOXC12P31275 282 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 EVI2BP34910 448 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 CPOXP36551 454 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 CLDN15P56746 228 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 TMEM107Q6UX40 140 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 TRMT10CQ7L0Y3 403 aaKnown RBP13.75□□□□□ -0.21
CTNS-209ENST00000574776 CNEP1R1Q8N9A8 125 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 FADS6Q8N9I5 356 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 OR2M3Q8NG83 312 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 OR5M1Q8NGP8 315 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 RTN4RQ9BZR6 473 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 GSTO2Q9H4Y5 243 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 NEUROD4Q9HD90 331 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 SDHAF3Q9NRP4 125 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 C19orf53Q9UNZ5 99 aaPredicted RBP13.75□□□□□ -0.21
CTNS-209ENST00000574776 EIF3LQ9Y262 564 aaKnown RBP13.75□□□□□ -0.21
CTNS-209ENST00000574776 ZNF337Q9Y3M9 751 aa13.75□□□□□ -0.21
CTNS-209ENST00000574776 A0A087WV62 115 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 SLC22A20A6NK97 555 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 H0YC42 278 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 UPK1AO00322 258 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 MSTNO14793 375 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 RIPK2O43353 540 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 COQ9O75208 318 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 MC3RP41968 323 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 GSTM5P46439 218 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 SUCLG1P53597 346 aaKnown RBP13.74□□□□□ -0.21
CTNS-209ENST00000574776 TPD52P55327 224 aaPredicted RBP13.74□□□□□ -0.21
CTNS-209ENST00000574776 ZNF763Q0D2J5 394 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 STX5Q13190 355 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 SLC29A2Q14542 456 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 CYP27C1Q4G0S4 372 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 OR2A2Q6IF42 318 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 FAM71E1Q6IPT2 247 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 VWA1Q6PCB0 445 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 BTLAQ7Z6A9 289 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 MEIOBQ8N635 442 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.74□□□□□ -0.21
CTNS-209ENST00000574776 ACMSDQ8TDX5 336 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 DUSP19Q8WTR2 217 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 SMPDL3BQ92485 455 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 FIG4Q92562 907 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 WFIKKN1Q96NZ8 548 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 SMR3AQ99954 134 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 GLIPR2Q9H4G4 154 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 MIEF1Q9NQG6 463 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 TBK1Q9UHD2 729 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 DCDC2Q9UHG0 476 aa13.74□□□□□ -0.21
CTNS-209ENST00000574776 A0A1W2PPM1 405 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 G3V2L1 256 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 CRHP06850 196 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 GSTA1P08263 222 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 FAM153BP0C7A2 387 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 KIR2DL2P43627 348 aaPredicted RBP13.73□□□□□ -0.21
CTNS-209ENST00000574776 RFX3P48380 749 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 NKX6-1P78426 367 aaPredicted RBP13.73□□□□□ -0.21
CTNS-209ENST00000574776 DECR1Q16698 335 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 IMPG1Q17R60 797 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 FAM153CQ494X1 144 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 RAET1LQ5VY80 246 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 ZNF474Q6S9Z5 364 aaPredicted RBP13.73□□□□□ -0.21
CTNS-209ENST00000574776 Q71RC1 249 aaPredicted RBP13.73□□□□□ -0.21
CTNS-209ENST00000574776 MARCH3Q86UD3 253 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 ELP4Q96EB1 424 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 PGM2Q96G03 612 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 AMDHD1Q96NU7 426 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 FAM111AQ96PZ2 611 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 SHCBP1LQ9BZQ2 653 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 OPN3Q9H1Y3 402 aaPredicted RBP13.73□□□□□ -0.21
CTNS-209ENST00000574776 BEX4Q9NWD9 120 aaPredicted RBP13.73□□□□□ -0.21
CTNS-209ENST00000574776 KLHL28Q9NXS3 571 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 TAS2R7Q9NYW3 318 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 C6orf203Q9P0P8 240 aaPredicted RBP13.73□□□□□ -0.21
CTNS-209ENST00000574776 EMCNQ9ULC0 261 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 GRID1Q9ULK0 1009 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 TESMINQ9Y4I5 508 aa13.73□□□□□ -0.21
CTNS-209ENST00000574776 POLR3HQ9Y535 204 aaPredicted RBP13.73□□□□□ -0.21
CTNS-209ENST00000574776 OR2M5A3KFT3 312 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 SEC14L5O43304 696 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 TNFRSF21O75509 655 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 MYL2P10916 166 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 CD79BP40259 229 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 CLDN20P56880 219 aa13.72□□□□□ -0.21
CTNS-209ENST00000574776 EEFSECP57772 596 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms