RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 PHF12Q96QT6 1004 aa15.31■□□□□ 0.04
TMEM88-202ENST00000574668 TAAR6Q96RI8 345 aa15.31■□□□□ 0.04
TMEM88-202ENST00000574668 TRIM45Q9H8W5 580 aaPredicted RBP15.31■□□□□ 0.04
TMEM88-202ENST00000574668 GPATCH2Q9NW75 528 aa15.31■□□□□ 0.04
TMEM88-202ENST00000574668 CBLCQ9ULV8 474 aa15.31■□□□□ 0.04
TMEM88-202ENST00000574668 TEP1Q99973 2627 aaKnown RBP15.31■□□□□ 0.04
TMEM88-202ENST00000574668 A0A096LPI6 279 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 A0A1B0GUH1 482 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 PPM1BO75688 479 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 SLC25A12O75746 678 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 DCTN3O75935 186 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 NKX2-2O95096 273 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 CD1EP15812 388 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 NAGAP17050 411 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 ABCD3P28288 659 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 RFX3P48380 749 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 ANXA11P50995 505 aaKnown RBP15.3■□□□□ 0.04
TMEM88-202ENST00000574668 TDGF1P3P51864 188 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 PSMD4P55036 377 aaKnown RBP15.3■□□□□ 0.04
TMEM88-202ENST00000574668 MRPS22P82650 360 aaKnown RBP15.3■□□□□ 0.04
TMEM88-202ENST00000574668 CYLC2Q14093 348 aaPredicted RBP15.3■□□□□ 0.04
TMEM88-202ENST00000574668 PAGE3Q5JUK9 113 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 SAXO2Q658L1 398 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 ZNF324BQ6AW86 544 aaPredicted RBP15.3■□□□□ 0.04
TMEM88-202ENST00000574668 RPUSD3Q6P087 351 aaKnown RBP15.3■□□□□ 0.04
TMEM88-202ENST00000574668 LYPD8Q6UX82 237 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 SNX32Q86XE0 403 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 SLC16A11Q8NCK7 471 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 CCDC197Q8NCU1 140 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 MDS2Q8NDY4 140 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 OR5M3Q8NGP4 307 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 PIK3R3Q92569 461 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 TMBIM1Q969X1 311 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 NEURL3Q96EH8 262 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 OTUB1Q96FW1 271 aaPredicted RBP15.3■□□□□ 0.04
TMEM88-202ENST00000574668 STACQ99469 402 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 PIGUQ9H490 435 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 SLC52A3Q9NQ40 469 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 KLHL1Q9NR64 748 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 PCDHGB3Q9Y5G1 929 aa15.3■□□□□ 0.04
TMEM88-202ENST00000574668 LOC100653049A0A140TA62 436 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 GXYLT2A0PJZ3 443 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 ASPDHA6ND91 283 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 DUXAA6NLW8 204 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 KRT34O76011 436 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 P04436 131 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 KHKP50053 298 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 CASP9P55211 416 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 RPS26P62854 115 aaKnown RBP15.29■□□□□ 0.04
TMEM88-202ENST00000574668 POU6F2P78424 691 aaPredicted RBP15.29■□□□□ 0.04
TMEM88-202ENST00000574668 NFYCQ13952 458 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 NTRK2Q16620 822 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 DUSP5Q16690 384 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 ZNF791Q3KP31 576 aaPredicted RBP15.29■□□□□ 0.04
TMEM88-202ENST00000574668 GTDC1Q4AE62 458 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 SLC22A10Q63ZE4 541 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 NUP54Q7Z3B4 507 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 MTERF4Q7Z6M4 381 aaKnown RBP15.29■□□□□ 0.04
TMEM88-202ENST00000574668 RNF130Q86XS8 419 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 GOLM1Q8NBJ4 401 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 TMEM178AQ8NBL3 297 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 OR4N2Q8NGD1 307 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 DNAJB8Q8NHS0 232 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 HOXB13Q92826 284 aaPredicted RBP15.29■□□□□ 0.04
TMEM88-202ENST00000574668 RMND5BQ96G75 393 aaPredicted RBP15.29■□□□□ 0.04
TMEM88-202ENST00000574668 OR7D2Q96RA2 312 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 CCDC106Q9BWC9 280 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 PAIP1Q9H074 479 aaKnown RBP15.29■□□□□ 0.04
TMEM88-202ENST00000574668 OR51I1Q9H343 314 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 RAD21L1Q9H4I0 556 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 DUSP22Q9NRW4 184 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 SACM1LQ9NTJ5 587 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 GIN1Q9NXP7 522 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.29■□□□□ 0.04
TMEM88-202ENST00000574668 PCDHB14Q9Y5E9 798 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 CSMD2Q7Z408 3487 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 CPAMD8Q8IZJ3 1885 aa15.29■□□□□ 0.04
TMEM88-202ENST00000574668 BBIP1A8MTZ0 92 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 NDUFAB1O14561 156 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 HS6ST1O60243 411 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 ABCB7O75027 752 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 NEURL1O76050 574 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 SP1P08047 785 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 MAP3K8P41279 467 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 FBXW4P57775 412 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 TXNL4AP83876 142 aaKnown RBP15.28■□□□□ 0.04
TMEM88-202ENST00000574668 STX5Q13190 355 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 EFR3AQ14156 821 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 TNFAIP8L2Q6P589 184 aaPredicted RBP15.28■□□□□ 0.04
TMEM88-202ENST00000574668 DHDDSQ86SQ9 333 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 ANKS4BQ8N8V4 417 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 FAM98AQ8NCA5 519 aaKnown RBP15.28■□□□□ 0.04
TMEM88-202ENST00000574668 PSD4Q8NDX1 1056 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 OR10G3Q8NGC4 313 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 RP9Q8TA86 221 aaKnown RBP15.28■□□□□ 0.04
TMEM88-202ENST00000574668 PNPT1Q8TCS8 783 aaKnown RBP15.28■□□□□ 0.04
TMEM88-202ENST00000574668 BCAS4Q8TDM0 211 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 ZFP90Q8TF47 636 aa15.28■□□□□ 0.04
TMEM88-202ENST00000574668 ITLN2Q8WWU7 325 aaPredicted RBP15.28■□□□□ 0.04
TMEM88-202ENST00000574668 CDS1Q92903 461 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms