RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 UCNP55089 124 aa3.13□□□□□ -1.91
CDC27-216ENST00000574304 UBXN1Q04323 297 aa3.13□□□□□ -1.91
CDC27-216ENST00000574304 SRYQ05066 204 aa3.13□□□□□ -1.91
CDC27-216ENST00000574304 CYP51A1Q16850 503 aa3.13□□□□□ -1.91
CDC27-216ENST00000574304 C2orf76Q3KRA6 126 aa3.13□□□□□ -1.91
CDC27-216ENST00000574304 AGKQ53H12 422 aa3.13□□□□□ -1.91
CDC27-216ENST00000574304 SPATA46Q5T0L3 261 aa3.13□□□□□ -1.91
CDC27-216ENST00000574304 TRPM8Q7Z2W7 1104 aa3.13□□□□□ -1.91
CDC27-216ENST00000574304 CSNK1A1LQ8N752 337 aa3.13□□□□□ -1.91
CDC27-216ENST00000574304 WDR36Q8NI36 951 aaKnown RBP3.13□□□□□ -1.91
CDC27-216ENST00000574304 SPATA13Q96N96 652 aa3.13□□□□□ -1.91
CDC27-216ENST00000574304 COQ7Q99807 217 aa3.13□□□□□ -1.91
CDC27-216ENST00000574304 DUS2Q9NX74 493 aaKnown RBP3.13□□□□□ -1.91
CDC27-216ENST00000574304 CYP39A1Q9NYL5 469 aa3.13□□□□□ -1.91
CDC27-216ENST00000574304 EHFQ9NZC4 300 aa3.13□□□□□ -1.91
CDC27-216ENST00000574304 TRIM10Q9UDY6 481 aa3.13□□□□□ -1.91
CDC27-216ENST00000574304 PINLYPA6NC86 204 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 VEGFDO43915 354 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 RAMP1O60894 148 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 ZNF254O75437 659 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 PNPP00491 289 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 SLC35G4P0C7Q5 338 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 NR2C1P13056 603 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 MDKP21741 143 aaPredicted RBP3.12□□□□□ -1.91
CDC27-216ENST00000574304 COPB2P35606 906 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 BCL2L1Q07817 233 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 LASP1Q14847 261 aaKnown RBP3.12□□□□□ -1.91
CDC27-216ENST00000574304 PKN2Q16513 984 aaKnown RBP3.12□□□□□ -1.91
CDC27-216ENST00000574304 IL17AQ16552 155 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 ZSWIM7Q19AV6 140 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 LRIT3Q3SXY7 679 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 LEG1Q6P5S2 330 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 P4HA3Q7Z4N8 544 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 TMEM179BQ7Z7N9 219 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 CCDC36Q8IYA8 594 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 RNF175Q8N4F7 328 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 OR10H4Q8NGA5 316 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 MARC2Q969Z3 335 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 CABS1Q96KC9 395 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 ZNF184Q99676 751 aaPredicted RBP3.12□□□□□ -1.91
CDC27-216ENST00000574304 FTHL17Q9BXU8 183 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 SIRPDQ9H106 197 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 GHRLQ9UBU3 117 aa3.12□□□□□ -1.91
CDC27-216ENST00000574304 EXOSC1Q9Y3B2 195 aaKnown RBP3.12□□□□□ -1.91
CDC27-216ENST00000574304 FBLL1A6NHQ2 334 aaKnown RBP3.11□□□□□ -1.91
CDC27-216ENST00000574304 PDXKO00764 312 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 IMPA2O14732 288 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 HTATSF1O43719 755 aaKnown RBP3.11□□□□□ -1.91
CDC27-216ENST00000574304 NUMBP49757 651 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 HERVK_113P63132 956 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 ERVK-8P63133 956 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 ACTN3Q08043 901 aaPredicted RBP3.11□□□□□ -1.91
CDC27-216ENST00000574304 ZP4Q12836 540 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 DPYSQ14117 519 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 CCDC14Q49A88 953 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 METTL11BQ5VVY1 283 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 ADAMTSL2Q86TH1 951 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 TADA1Q96BN2 335 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 VPS39Q96JC1 886 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 ERVK-6Q9BXR3 956 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 ZNF221Q9UK13 617 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 DUSP12Q9UNI6 340 aa3.11□□□□□ -1.91
CDC27-216ENST00000574304 MEGF6O75095 1541 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 E9PLD3 99 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 TM9SF1O15321 606 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 ZNF32P17041 273 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 CDH5P33151 784 aaPredicted RBP3.1□□□□□ -1.91
CDC27-216ENST00000574304 MRPS6P82932 125 aaKnown RBP3.1□□□□□ -1.91
CDC27-216ENST00000574304 MYBPC1Q00872 1141 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 KCNJ11Q14654 390 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 HERPUD1Q15011 391 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 CYBRD1Q53TN4 286 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 OR2B11Q5JQS5 317 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 KHDRBS2Q5VWX1 349 aaKnown RBP3.1□□□□□ -1.91
CDC27-216ENST00000574304 SLX4IPQ5VYV7 408 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 FRA10AC1Q70Z53 315 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 NET1Q7Z628 596 aaPredicted RBP3.1□□□□□ -1.91
CDC27-216ENST00000574304 ARFGAP2Q8N6H7 521 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 SPC24Q8NBT2 197 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 BBS1Q8NFJ9 593 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 EXOC6Q8TAG9 804 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 ART4Q93070 314 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 CCDC43Q96MW1 224 aaKnown RBP3.1□□□□□ -1.91
CDC27-216ENST00000574304 PLEKHF1Q96S99 279 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 CNPY3Q9BT09 278 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 CCSER1Q9C0I3 900 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 PTGES2Q9H7Z7 377 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 PNO1Q9NRX1 252 aaKnown RBP3.1□□□□□ -1.91
CDC27-216ENST00000574304 BCAP29Q9UHQ4 241 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 ZNF490Q9ULM2 529 aaPredicted RBP3.1□□□□□ -1.91
CDC27-216ENST00000574304 L3MBTL1Q9Y468 752 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 NOTCH2Q04721 2471 aa3.1□□□□□ -1.91
CDC27-216ENST00000574304 DHRS7CA6NNS2 312 aa3.09□□□□□ -1.91
CDC27-216ENST00000574304 TRIM49D1C9J1S8 452 aa3.09□□□□□ -1.91
CDC27-216ENST00000574304 PPIHO43447 177 aaKnown RBP3.09□□□□□ -1.91
CDC27-216ENST00000574304 ZNF17P17021 662 aa3.09□□□□□ -1.91
CDC27-216ENST00000574304 FUT3P21217 361 aa3.09□□□□□ -1.91
CDC27-216ENST00000574304 GPC3P51654 580 aa3.09□□□□□ -1.91
CDC27-216ENST00000574304 PLOD1Q02809 727 aaPredicted RBP3.09□□□□□ -1.91
CDC27-216ENST00000574304 ORC2Q13416 577 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms