RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 MASP1P48740 699 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 TRPC1P48995 793 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 PPP2R2AP63151 447 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 CACNA1DQ01668 2161 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 ZNF763Q0D2J5 394 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 PCLAFQ15004 111 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 KIAA0040Q15053 153 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 CEBPEQ15744 281 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 NNATQ16517 81 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 CYP27C1Q4G0S4 372 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 ZNF628Q5EBL2 1059 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 BICRALQ6AI39 1079 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 CLEC6AQ6EIG7 209 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 FAM71E1Q6IPT2 247 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 NOXRED1Q6NXP6 359 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 SLC30A6Q6NXT4 461 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 EMBQ6PCB8 327 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 TICAM1Q8IUC6 712 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 MCEMP1Q8IX19 187 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 SRRM1Q8IYB3 904 aaKnown RBP6.8□□□□□ -1.32
NUP88-205ENST00000572809 LIX1Q8N485 282 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 MARVELD2Q8N4S9 558 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 POU5F2Q8N7G0 328 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 OR10Q1Q8NGQ4 319 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 OR1J4Q8NGS1 313 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 OR9A2Q8NGT5 310 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 LILRB4Q8NHJ6 448 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 CDC26Q8NHZ8 85 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 NEIL3Q8TAT5 605 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.8□□□□□ -1.32
NUP88-205ENST00000572809 AENQ8WTP8 325 aaKnown RBP6.8□□□□□ -1.32
NUP88-205ENST00000572809 ASB5Q8WWX0 329 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 KAT2AQ92830 837 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 ERP27Q96DN0 273 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 OMA1Q96E52 524 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 APOPT1Q96IL0 206 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 METTL2AQ96IZ6 378 aaKnown RBP6.8□□□□□ -1.32
NUP88-205ENST00000572809 ZNF597Q96LX8 424 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 CCDC140Q96MF4 163 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 RILPQ96NA2 401 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 GNRHR2Q96P88 292 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 FAM111AQ96PZ2 611 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 TRMOQ9BU70 441 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 GATA5Q9BWX5 397 aaPredicted RBP6.8□□□□□ -1.32
NUP88-205ENST00000572809 ITPAQ9BY32 194 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 ZNF703Q9H7S9 590 aaPredicted RBP6.8□□□□□ -1.32
NUP88-205ENST00000572809 ANKRA2Q9H9E1 313 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 TNFRSF12AQ9NP84 129 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 MIEF1Q9NQG6 463 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 MKS1Q9NXB0 559 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 TAS2R9Q9NYW1 312 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 TAS2R7Q9NYW3 318 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 B4GALT7Q9UBV7 327 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 GPR55Q9Y2T6 319 aaPredicted RBP6.8□□□□□ -1.32
NUP88-205ENST00000572809 FIS1Q9Y3D6 152 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 CCL27Q9Y4X3 112 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 POLR3HQ9Y535 204 aaPredicted RBP6.8□□□□□ -1.32
NUP88-205ENST00000572809 NINQ8N4C6 2090 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 UNC79Q9P2D8 2635 aa6.8□□□□□ -1.32
NUP88-205ENST00000572809 hCG_2014768A0A024R1R8 64 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 NBPF19A0A087WUL8 3843 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 TRBV23-1A0A0A0MS06 115 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 FRG2CA6NGY1 282 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 LRRC3CA6NJW4 275 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 MYO1GB0I1T2 1018 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 NPIPB8E9PQR5 432 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 C19orf84I3L1E1 186 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 TO15178 435 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 NPHS1O60500 1241 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 PLOD3O60568 738 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 WDR1O75083 606 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 ICOSLGO75144 302 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 NME6O75414 186 aaPredicted RBP6.79□□□□□ -1.32
NUP88-205ENST00000572809 ERN1O75460 977 aaKnown RBP6.79□□□□□ -1.32
NUP88-205ENST00000572809 REM1O75628 298 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 CHEK2O96017 543 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 JUNP05412 331 aaKnown RBP6.79□□□□□ -1.32
NUP88-205ENST00000572809 HPNP05981 417 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 SNRPB2P08579 225 aaKnown RBP6.79□□□□□ -1.32
NUP88-205ENST00000572809 LINC00032P0C843 101 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 CT45A8P0DMV1 189 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 CT45A9P0DMV2 189 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 PRF1P14222 555 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 GABRA1P14867 456 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 PRPH2P23942 346 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 ALDH3A1P30838 453 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 CHRNB4P30926 498 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 NCBP2P52298 156 aaKnown RBP eCLIP6.79□□□□□ -1.32
NUP88-205ENST00000572809 NUP107P57740 925 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 PLCXD2Q0VAA5 305 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 SNTA1Q13424 505 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 TOMM20Q15388 145 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 PRSS53Q2L4Q9 553 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 ERCC6LQ2NKX8 1250 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 CT45A2Q5DJT8 189 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 FNDC7Q5VTL7 733 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 TIGD3Q6B0B8 471 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 RTL6Q6ICC9 239 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 TMEM81Q6P7N7 255 aa6.79□□□□□ -1.32
NUP88-205ENST00000572809 B3GNT6Q6ZMB0 384 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms