RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 TNFSF13O75888 250 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 EPXP11678 715 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 KRT4P19013 534 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 IL12BP29460 328 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 MAP3K8P41279 467 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 DGKQP52824 942 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 SUCLG1P53597 346 aaKnown RBP16.38■□□□□ 0.21
CHD3-214ENST00000572579 ZNF155Q12901 538 aaPredicted RBP16.38■□□□□ 0.21
CHD3-214ENST00000572579 RCAN2Q14206 197 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 CCDC153Q494R4 210 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 CYP27C1Q4G0S4 372 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 SH2D4BQ5SQS7 431 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 C4orf33Q8N1A6 199 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 EIF1ADQ8N9N8 165 aaKnown RBP16.38■□□□□ 0.21
CHD3-214ENST00000572579 OR5M1Q8NGP8 315 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 HOXB13Q92826 284 aaPredicted RBP16.38■□□□□ 0.21
CHD3-214ENST00000572579 GFM2Q969S9 779 aaKnown RBP16.38■□□□□ 0.21
CHD3-214ENST00000572579 CIDECQ96AQ7 238 aaPredicted RBP16.38■□□□□ 0.21
CHD3-214ENST00000572579 FCRL1Q96LA6 429 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 SFXN2Q96NB2 322 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 FOXC2Q99958 501 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 LMF2Q9BU23 707 aaKnown RBP16.38■□□□□ 0.21
CHD3-214ENST00000572579 TMUB1Q9BVT8 246 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 GATA5Q9BWX5 397 aaPredicted RBP16.38■□□□□ 0.21
CHD3-214ENST00000572579 FOXD3Q9UJU5 478 aaPredicted RBP16.38■□□□□ 0.21
CHD3-214ENST00000572579 GRID1Q9ULK0 1009 aa16.38■□□□□ 0.21
CHD3-214ENST00000572579 DOCK7Q96N67 2140 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 TUBAL3A6NHL2 446 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 HCRTR2O43614 444 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 UROSP10746 265 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 CD1EP15812 388 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 PRPH2P23942 346 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 CHMP24386 653 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 CCT5P48643 541 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 RIPPLY3P57055 190 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 PCLAFQ15004 111 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 IMPG1Q17R60 797 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 UGT3A2Q3SY77 523 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 RFTN2Q52LD8 501 aaPredicted RBP16.37■□□□□ 0.21
CHD3-214ENST00000572579 ENPP6Q6UWR7 440 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 LUZP2Q86TE4 346 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 MARCH3Q86UD3 253 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 UBLCP1Q8WVY7 318 aaPredicted RBP16.37■□□□□ 0.21
CHD3-214ENST00000572579 NINJ1Q92982 152 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 PLEKHF2Q9H8W4 249 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 GALNT8Q9NY28 637 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 SENP1Q9P0U3 644 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 BAIAP2L1Q9UHR4 511 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 WBP11Q9Y2W2 641 aaKnown RBP16.37■□□□□ 0.21
CHD3-214ENST00000572579 ZNF337Q9Y3M9 751 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 OR10H1Q9Y4A9 318 aa16.37■□□□□ 0.21
CHD3-214ENST00000572579 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 A8MXE2 369 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 COQ9O75208 318 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 SEC22BO75396 215 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 IL33O95760 270 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 PEX19P40855 299 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 DSCR4P56555 118 aaPredicted RBP16.36■□□□□ 0.21
CHD3-214ENST00000572579 CFAP157Q5JU67 520 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 LIPMQ5VYY2 423 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 EXOC3L1Q86VI1 746 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 OR2W6PQ8NHA6 318 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 DUSP19Q8WTR2 217 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 FIG4Q92562 907 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 PIK3R3Q92569 461 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 STARD4Q96DR4 205 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 GIMAP5Q96F15 307 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 NPAS1Q99742 590 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 TM9SF2Q99805 663 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 KLHDC3Q9BQ90 382 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 SFXN3Q9BWM7 321 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 RBM24Q9BX46 236 aaKnown RBP16.36■□□□□ 0.21
CHD3-214ENST00000572579 LRTM1Q9HBL6 345 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 MIEF1Q9NQG6 463 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 RRAGDQ9NQL2 400 aaPredicted RBP16.36■□□□□ 0.21
CHD3-214ENST00000572579 DKKL1Q9UK85 242 aa16.36■□□□□ 0.21
CHD3-214ENST00000572579 A0A1W2PNV4 684 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 TMEM233B4DJY2 109 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 CHRNGP07510 517 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 SDC1P18827 310 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 ARRB2P32121 409 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 GABRA3P34903 492 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 KRT20P35900 424 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 PSPHP78330 225 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 SORDQ00796 357 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 STX5Q13190 355 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 BCL2A1Q16548 175 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 AAGABQ6PD74 315 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 IKBIPQ70UQ0 350 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 ZAR1Q86SH2 424 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 OR4K17Q8NGC6 315 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 NUDT8Q8WV74 236 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 L2HGDHQ9H9P8 463 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 DDX18Q9NVP1 670 aaKnown RBP16.35■□□□□ 0.21
CHD3-214ENST00000572579 C1orf109Q9NX04 203 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 PPP4R1LQ9P1A2 415 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 DNAJC15Q9Y5T4 150 aa16.35■□□□□ 0.21
CHD3-214ENST00000572579 SHISA8B8ZZ34 492 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 H3BQF6 201 aa16.34■□□□□ 0.21
CHD3-214ENST00000572579 COPEO14579 308 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms