RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 C1orf122Q6ZSJ8 110 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 NLRP9Q7RTR0 991 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 MAATS1Q7Z4T9 603 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 LSMEM2Q8N112 164 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 CHCHD4Q8N4Q1 142 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 DNAAF3Q8N9W5 541 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 L3MBTL4Q8NA19 623 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 OR2T12Q8NG77 320 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 CCDC110Q8TBZ0 833 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 MAPK15Q8TD08 544 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 BLOC1S5Q8TDH9 187 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 HEXDCQ8WVB3 486 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 TMEM159Q96B96 161 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 ULK4Q96C45 1275 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 DCUN1D1Q96GG9 259 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 ZNF514Q96K75 400 aaPredicted RBP3.61□□□□□ -1.83
NUP88-202ENST00000570937 VPS35Q96QK1 796 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 OR2M4Q96R27 311 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 DDOQ99489 341 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 ASCL2Q99929 193 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 TBL1YQ9BQ87 522 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 SRSF8Q9BRL6 282 aaKnown RBP3.61□□□□□ -1.83
NUP88-202ENST00000570937 TMEM121Q9BTD3 319 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 HGH1Q9BTY7 390 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 LRRC61Q9BV99 259 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 FICDQ9BVA6 458 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 EIF2B3Q9NR50 452 aaKnown RBP3.61□□□□□ -1.83
NUP88-202ENST00000570937 AKAP7Q9P0M2 348 aaPredicted RBP3.61□□□□□ -1.83
NUP88-202ENST00000570937 PAK5Q9P286 719 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 NFKBIL1Q9UBC1 381 aaPredicted RBP3.61□□□□□ -1.83
NUP88-202ENST00000570937 CD84Q9UIB8 345 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 SLC17A4Q9Y2C5 497 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 PCDH15Q96QU1 1955 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 PI4KAP42356 2102 aa3.61□□□□□ -1.83
NUP88-202ENST00000570937 GON4LQ3T8J9 2241 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 NYNRINQ9P2P1 1898 aaKnown RBP3.6□□□□□ -1.83
NUP88-202ENST00000570937 TRPM6Q9BX84 2022 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 MAGEB16A2A368 324 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 HEATR9A2RTY3 570 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 PGRMC1O00264 195 aaKnown RBP3.6□□□□□ -1.83
NUP88-202ENST00000570937 NDC80O14777 642 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 PFDN6O15212 129 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 KMOO15229 486 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 SLC22A2O15244 555 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 INPP4BO15327 924 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 CDK14O94921 469 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 AP2A1O95782 977 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 AGTP01019 485 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 H1F0P07305 194 aaKnown RBP3.6□□□□□ -1.83
NUP88-202ENST00000570937 APRTP07741 180 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 PIRTP0C851 137 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 TCP1P17987 556 aaKnown RBP3.6□□□□□ -1.83
NUP88-202ENST00000570937 CAPN3P20807 821 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 IDSP22304 550 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 PSMB4P28070 264 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 ALDH4A1P30038 563 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 ADRA1AP35348 466 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 PSMB10P40306 273 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 ACTR1BP42025 376 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 ACTR1AP61163 376 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 ARF3P61204 181 aaPredicted RBP3.6□□□□□ -1.83
NUP88-202ENST00000570937 GNG11P61952 73 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 ARF1P84077 181 aaKnown RBP3.6□□□□□ -1.83
NUP88-202ENST00000570937 CDK16Q00536 496 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 CDH17Q12864 832 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 DNAJC3Q13217 504 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 EIF3IQ13347 325 aaKnown RBP3.6□□□□□ -1.83
NUP88-202ENST00000570937 SNX1Q13596 522 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 IHHQ14623 411 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 NUMA1Q14980 2115 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 CDKN3Q16667 212 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 KIAA1644Q3SXP7 199 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 C14orf28Q4W4Y0 310 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 PYCR3Q53H96 274 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 TPRG1LQ5T0D9 272 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 HENMT1Q5T8I9 393 aaKnown RBP3.6□□□□□ -1.83
NUP88-202ENST00000570937 HES3Q5TGS1 186 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 LYPLAL1Q5VWZ2 237 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 ARMC3Q5W041 872 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 KLC3Q6P597 504 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 EFL1Q7Z2Z2 1120 aaKnown RBP3.6□□□□□ -1.83
NUP88-202ENST00000570937 AMZ2Q86W34 360 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 TRAPPC5Q8IUR0 188 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 PLD3Q8IV08 490 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 ARL14Q8N4G2 192 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 GPR26Q8NDV2 337 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 ACTRT1Q8TDG2 376 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 GRK7Q8WTQ7 553 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 C1orf54Q8WWF1 131 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 OR1E3Q8WZA6 343 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 GLYATL1Q969I3 302 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.6□□□□□ -1.83
NUP88-202ENST00000570937 MAGOHBQ96A72 148 aaKnown RBP3.6□□□□□ -1.83
NUP88-202ENST00000570937 NXPE2Q96DL1 559 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 SLC47A1Q96FL8 570 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 PDXPQ96GD0 296 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 COX14Q96I36 57 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 LRR1Q96L50 414 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 NSMCE3Q96MG7 304 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 RUNDC3BQ96NL0 473 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms