RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ZNF451Q9Y4E5 1061 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 SNX13Q9Y5W8 968 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 GMEB1Q9Y692 573 aa6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 SNRNP200O75643 2136 aaKnown RBP6.1□□□□□ -1.43
CTDNEP1-204ENST00000570484 NUP210LQ5VU65 1888 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 GOLGA4Q13439 2230 aaKnown RBP6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 ASXL3Q9C0F0 2248 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 TMEM8BA6NDV4 472 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 PRORSD1PA6NEY8 169 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 A8MUI8 341 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 WWP2O00308 870 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 CXCR6O00574 342 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 ARPC2O15144 300 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 GSC2O15499 205 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 TLX3O43711 291 aaPredicted RBP6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 NME6O75414 186 aaPredicted RBP6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 STX11O75558 287 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 NKX2-2O95096 273 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 H6PDO95479 791 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 CLPSP04118 112 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 ALPPP05187 535 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 ARAFP10398 606 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 CD33P20138 364 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 S1PR1P21453 382 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 DRD5P21918 477 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 HTR1EP28566 365 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 AQP1P29972 269 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 PPICP45877 212 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 SSR4P51571 173 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 POLE2P56282 527 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 TMPRSS3P57727 454 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 RPP38P78345 283 aaKnown RBP6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 CDK6Q00534 326 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 DUSP8Q13202 625 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 CEACAM7Q14002 265 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 CYP27C1Q4G0S4 372 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 FLYWCH1Q4VC44 716 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 PIGGQ5H8A4 983 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 MTX3Q5HYI7 312 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 ATP1A1-AS1Q5TC04 95 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 ABHD17BQ5VST6 288 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 REEP3Q6NUK4 255 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 ASRGL1Q7L266 308 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 GPR155Q7Z3F1 870 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 NET1Q7Z628 596 aaPredicted RBP6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 PATL1Q86TB9 770 aaKnown RBP6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 DHFR2Q86XF0 187 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 PROSER1Q86XN7 944 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 SPACA3Q8IXA5 215 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 PEX5LQ8IYB4 626 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZZZ3Q8IYH5 903 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 SLC34A3Q8N130 599 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 TMEM156Q8N614 296 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 SIRT6Q8N6T7 355 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 ZNF614Q8N883 585 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 FAM156AQ8NDB6 213 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 SIMC1Q8NDZ2 872 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 NFAM1Q8NET5 270 aaPredicted RBP6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 SPPL2AQ8TCT8 520 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 ADAMTS17Q8TE56 1095 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 ASB15Q8WXK1 588 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 PIK3R3Q92569 461 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 GATA6Q92908 595 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 MAL2Q969L2 176 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 HSPBAP1Q96EW2 488 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 C16orf58Q96GQ5 468 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 TMEM19Q96HH6 336 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 CLPTM1LQ96KA5 538 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 IMMP1LQ96LU5 166 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 NSMCE2Q96MF7 247 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 RNF145Q96MT1 663 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 TRNT1Q96Q11 434 aaKnown RBP6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 LHPPQ9H008 270 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 NXF5Q9H1B4 397 aaKnown RBP6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 SERHL2Q9H4I8 314 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 ARMC7Q9H6L4 198 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 POLE3Q9NRF9 147 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 ADPRHL2Q9NX46 363 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 SEC14L3Q9UDX4 400 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 RPS6KA6Q9UK32 745 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 PACSIN3Q9UKS6 424 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 FAM186AA6NE01 2351 aa6.09□□□□□ -1.43
CTDNEP1-204ENST00000570484 HEATR5BQ9P2D3 2071 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 A0A0G2JPF8 293 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 GXYLT2A0PJZ3 443 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 HNRNPCL2B2RXH8 293 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 HNRNPCL3B7ZW38 293 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 H3BNH8 94 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 SCDO00767 359 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 TP53I11O14683 189 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 NKX2-8O15522 239 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 WIPF1O43516 503 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 KIAA0513O60268 411 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 TNFRSF21O75509 655 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ITGA10O75578 1167 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 REM1O75628 298 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 SERPINB7O75635 380 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 OR2J2O76002 312 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF682O95780 498 aa6.08□□□□□ -1.44
CTDNEP1-204ENST00000570484 CELA2AP08217 269 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms