RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 CRB3Q9BUF7 120 aa9.28□□□□□ -0.92
GDE1-205ENST00000569899 SLC26A1Q9H2B4 701 aa9.28□□□□□ -0.92
GDE1-205ENST00000569899 TPSG1Q9NRR2 321 aa9.28□□□□□ -0.92
GDE1-205ENST00000569899 CCM2LQ9NUG4 571 aaPredicted RBP9.28□□□□□ -0.92
GDE1-205ENST00000569899 OLAHQ9NV23 265 aa9.28□□□□□ -0.92
GDE1-205ENST00000569899 THUMPD1Q9NXG2 353 aaKnown RBP9.28□□□□□ -0.92
GDE1-205ENST00000569899 C3orf18Q9UK00 162 aa9.28□□□□□ -0.92
GDE1-205ENST00000569899 AP4S1Q9Y587 144 aa9.28□□□□□ -0.92
GDE1-205ENST00000569899 HEMK1Q9Y5R4 338 aaPredicted RBP9.28□□□□□ -0.92
GDE1-205ENST00000569899 CNOT1A5YKK6 2376 aaKnown RBP9.28□□□□□ -0.92
GDE1-205ENST00000569899 IGHV3-20A0A0C4DH32 117 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 TMEM247A6NEH6 219 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 C9J4A7 227 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 ALOX12BO75342 701 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 H6PDO95479 791 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 DDAH2O95865 285 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 KLK3P07288 261 aaPredicted RBP9.27□□□□□ -0.92
GDE1-205ENST00000569899 UMPSP11172 480 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 CDK4P11802 303 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 MAP3K8P41279 467 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 NOVA1P51513 510 aaKnown RBP9.27□□□□□ -0.92
GDE1-205ENST00000569899 CLCN2P51788 898 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 TXNL4AP83876 142 aaKnown RBP9.27□□□□□ -0.92
GDE1-205ENST00000569899 TARDBPQ13148 414 aaKnown RBP eCLIP9.27□□□□□ -0.92
GDE1-205ENST00000569899 BIKQ13323 160 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 NCF4Q15080 339 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 NNATQ16517 81 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 GPAT3Q53EU6 434 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 CYBRD1Q53TN4 286 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 ZNF517Q6ZMY9 492 aaPredicted RBP9.27□□□□□ -0.92
GDE1-205ENST00000569899 CBLL1Q75N03 491 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 CCDC80Q76M96 950 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 EIF3MQ7L2H7 374 aaKnown RBP9.27□□□□□ -0.92
GDE1-205ENST00000569899 C16orf62Q7Z3J2 963 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 ANKRD37Q7Z713 158 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 VTCN1Q7Z7D3 282 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 HMGN2P46Q86SG4 172 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 SLC30A8Q8IWU4 369 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 EID3Q8N140 333 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 PQLC1Q8N2U9 271 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 ZNF615Q8N8J6 731 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 CDRT4Q8N9R6 151 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 C16orf52Q8NHV5 167 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 SLC2A12Q8TD20 617 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 PIK3R3Q92569 461 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 TP53INP1Q96A56 240 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 FBXL20Q96IG2 436 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 PKP2Q99959 881 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 TREX2Q9BQ50 279 aaPredicted RBP9.27□□□□□ -0.92
GDE1-205ENST00000569899 ZPBPQ9BS86 351 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 ITPAQ9BY32 194 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 OR8D2Q9GZM6 311 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 OR10A5Q9H207 317 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 GSX1Q9H4S2 264 aaPredicted RBP9.27□□□□□ -0.92
GDE1-205ENST00000569899 RIMS3Q9UJD0 308 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 ANGPTL2Q9UKU9 493 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 SAMD4AQ9UPU9 718 aaKnown RBP9.27□□□□□ -0.92
GDE1-205ENST00000569899 CLCA3PQ9Y6N3 262 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 CEP250Q9BV73 2442 aa9.27□□□□□ -0.92
GDE1-205ENST00000569899 KNTC1P50748 2209 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 GXYLT2A0PJZ3 443 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 A8MVJ9 347 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 MSTNO14793 375 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 PGM3O95394 542 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 ALOX5P09917 674 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 CRISP3P54108 245 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 EMP2P54851 167 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 SLC34A1Q06495 639 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 DOC2BQ14184 412 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 FAM98BQ52LJ0 330 aaKnown RBP9.27□□□□□ -0.93
GDE1-205ENST00000569899 SFT2D3Q587I9 215 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 CRB2Q5IJ48 1285 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 CCNJQ5T5M9 372 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 ATAD3BQ5T9A4 648 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 IRAK1BP1Q5VVH5 260 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 HEPHL1Q6MZM0 1159 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 HMBOX1Q6NT76 420 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 LRFN4Q6PJG9 635 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 NPSR1Q6W5P4 371 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 TIPARPQ7Z3E1 657 aaKnown RBP9.27□□□□□ -0.93
GDE1-205ENST00000569899 PATL1Q86TB9 770 aaKnown RBP9.27□□□□□ -0.93
GDE1-205ENST00000569899 COX18Q8N8Q8 333 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 SMYD1Q8NB12 490 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 OR14A16Q8NHC5 309 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 BBS10Q8TAM1 723 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 ZNF721Q8TF20 911 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 LRTOMTQ8WZ04 291 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 HOXB13Q92826 284 aaPredicted RBP9.27□□□□□ -0.93
GDE1-205ENST00000569899 PLPPR2Q96GM1 343 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 TPD52L3Q96J77 140 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 RNF145Q96MT1 663 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 VSTM2LQ96N03 204 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 ZNF578Q96N58 590 aaPredicted RBP9.27□□□□□ -0.93
GDE1-205ENST00000569899 FANCD2OSQ96PS1 177 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 STACQ99469 402 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 LMF2Q9BU23 707 aaKnown RBP9.27□□□□□ -0.93
GDE1-205ENST00000569899 SLC38A1Q9H2H9 487 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 PIGUQ9H490 435 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 WDR54Q9H977 334 aa9.27□□□□□ -0.93
GDE1-205ENST00000569899 DUSP22Q9NRW4 184 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms