RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 TMEM126BQ8IUX1 230 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 LAX1Q8IWV1 398 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 NECAB1Q8N987 351 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 WDSUB1Q8N9V3 476 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 LEMD2Q8NC56 503 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 OR56B1Q8NGI3 324 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 SSMEM1Q8WWF3 244 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 CKAP2Q8WWK9 683 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 MRPS31Q92665 395 aaKnown RBP2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 PROX1Q92786 737 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 DAZLQ92904 295 aaKnown RBP2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 SLCO4A1Q96BD0 722 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 SLC47A1Q96FL8 570 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 IFT74Q96LB3 600 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 SENP8Q96LD8 212 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 LMF2Q9BU23 707 aaKnown RBP2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 TRIM9Q9C026 710 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 RAB33BQ9H082 229 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 CUEDC2Q9H467 287 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 PRORYQ9H606 182 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 SIX2Q9NPC8 291 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 ATAD3AQ9NVI7 634 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 FAM153AQ9UHL3 310 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 PLA2G4CQ9UP65 541 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 C2CD2Q9Y426 696 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 NME7Q9Y5B8 376 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 CELSR3Q9NYQ7 3312 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 SMG1Q96Q15 3661 aaKnown RBP2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 ZFC3H1O60293 1989 aaKnown RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 A0A087X002 238 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 A0A087X0K7 114 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 IGHV1OR15-9A0A0B4J2B8 117 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 HYKKA2RU49 373 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 HHLA1C9JL84 531 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 BOLA2-SMG1P6H3BVE0 249 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 GMNNO75496 209 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 RAD51DO75771 328 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 LYPLA2O95372 231 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 CTDNEP1O95476 244 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 C9P02748 559 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 APODP05090 189 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 PCCBP05166 539 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 DLATP10515 647 aaKnown RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 MCF2P10911 925 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 ODC1P11926 461 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 LIFP15018 202 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 CPA3P15088 417 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 KCNE1P15382 129 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 HNRNPA2B1P22626 353 aaKnown RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 CCT6AP40227 531 aaKnown RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 TUFMP49411 452 aaKnown RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 CSNK1EP49674 416 aaKnown RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 ACOT2P49753 483 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 GBE1Q04446 702 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 PPP1R8Q12972 351 aaKnown RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 PLA2G7Q13093 441 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 PDZK1IP1Q13113 114 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 DNAJC3Q13217 504 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 CUL2Q13617 745 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 TSTA3Q13630 321 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 VEZF1Q14119 521 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 PDGFRLQ15198 375 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 FCN2Q15485 313 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 ZBTB6Q15916 424 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 ZNF77Q15935 545 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 HLA-BQ31612 363 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 ZNF770Q6IQ21 691 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 B3GLCTQ6Y288 498 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 PHLDB2Q86SQ0 1253 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 ZNF573Q86YE8 665 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 PLD3Q8IV08 490 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 CROCCP3Q8IVE0 287 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 DAW1Q8N136 415 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 ARHGAP24Q8N264 748 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 RASGEF1AQ8N9B8 481 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 OR52M1Q8NGK5 317 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 SAP25Q8TEE9 199 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 TUBGCP3Q96CW5 907 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 LRR1Q96L50 414 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 MTMR9Q96QG7 549 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 FAM213AQ9BRX8 229 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 RHNO1Q9BSD3 238 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 TPPP3Q9BW30 176 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 GPR174Q9BXC1 333 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 BARHL1Q9BZE3 327 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 SLC39A8Q9C0K1 460 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 SIRPDQ9H106 197 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 TMEM245Q9H330 911 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 RIBC2Q9H4K1 309 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 CLMPQ9H6B4 373 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 PPANQ9NQ55 473 aaKnown RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 PHPT1Q9NRX4 125 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 ZCCHC3Q9NUD5 404 aaKnown RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 PIGVQ9NUD9 493 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 DDX19AQ9NUU7 478 aaKnown RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 SMPD3Q9NY59 655 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 TXNDC16Q9P2K2 825 aa2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 NOCTQ9UK39 431 aaKnown RBP2.95□□□□□ -1.94
HMGB1P6-201ENST00000569046 WDR83OSQ9Y284 106 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms