RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 TNPO3Q9Y5L0 923 aaKnown RBP11.17□□□□□ -0.62
SNX29-207ENST00000568949 AP4B1Q9Y6B7 739 aa11.17□□□□□ -0.62
SNX29-207ENST00000568949 ZNF780BQ9Y6R6 833 aa11.17□□□□□ -0.62
SNX29-207ENST00000568949 YLPM1P49750 1951 aaKnown RBP11.16□□□□□ -0.62
SNX29-207ENST00000568949 FAM159BA6NKW6 160 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 C17orf51A8MQB3 221 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 H3BML4 177 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 ADAM11O75078 769 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 PLGP00747 810 aaPredicted RBP11.16□□□□□ -0.62
SNX29-207ENST00000568949 GFAPP14136 432 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 SSTR1P30872 391 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 CDKN1AP38936 164 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 CORO7P57737 925 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 MRPS35P82673 323 aaKnown RBP11.16□□□□□ -0.62
SNX29-207ENST00000568949 DR1Q01658 176 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 DUSP2Q05923 314 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 ZNF628Q5EBL2 1059 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 C6orf52Q5T4I8 152 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 GRTP1Q5TC63 336 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 FRG2Q64ET8 278 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.16□□□□□ -0.62
SNX29-207ENST00000568949 CMC1Q7Z7K0 106 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 STK32CQ86UX6 486 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 STEAP2Q8NFT2 490 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 TM4SF18Q96CE8 201 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 NXNL1Q96CM4 212 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 C11orf24Q96F05 449 aaPredicted RBP11.16□□□□□ -0.62
SNX29-207ENST00000568949 CNRIP1Q96F85 164 aaPredicted RBP11.16□□□□□ -0.62
SNX29-207ENST00000568949 VSTM2LQ96N03 204 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 FRG2BQ96QU4 278 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 PRRG4Q9BZD6 226 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 GRIP2Q9C0E4 1043 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 PTGES2Q9H7Z7 377 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 GLRX2Q9NS18 164 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 RNF14Q9UBS8 474 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 SNX12Q9UMY4 172 aa11.16□□□□□ -0.62
SNX29-207ENST00000568949 MAGED1Q9Y5V3 778 aaPredicted RBP11.16□□□□□ -0.62
SNX29-207ENST00000568949 A0A1W2PP18 115 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 TCRBV9S1A1TA0A576 114 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 SCO2O43819 266 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 FESP07332 822 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 CD3EP07766 207 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 EVI2BP34910 448 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 SLC6A8P48029 635 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 ZNF844Q08AG5 666 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.15□□□□□ -0.62
SNX29-207ENST00000568949 NCMAPQ5T1S8 102 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 NPSR1Q6W5P4 371 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 COMMD6Q7Z4G1 85 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 CCDC91Q7Z6B0 441 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 EXOC3L1Q86VI1 746 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 OR5M1Q8NGP8 315 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 EFHD2Q96C19 240 aaPredicted RBP11.15□□□□□ -0.62
SNX29-207ENST00000568949 C1GALT1C1Q96EU7 318 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 HS6ST2Q96MM7 605 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 RHNO1Q9BSD3 238 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 C19orf24Q9BVV8 132 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 FAIM2Q9BWQ8 316 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 HDHD5Q9BXW7 423 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 BEX2Q9BXY8 128 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 KCNF1Q9H3M0 494 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 ESRP2Q9H6T0 727 aaKnown RBP11.15□□□□□ -0.62
SNX29-207ENST00000568949 NGBQ9NPG2 151 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 PAQR5Q9NXK6 330 aaPredicted RBP11.15□□□□□ -0.62
SNX29-207ENST00000568949 MED11Q9P086 117 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 STOML1Q9UBI4 398 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 LPAR3Q9UBY5 353 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 ABCG2Q9UNQ0 655 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 SNX8Q9Y5X2 465 aa11.15□□□□□ -0.62
SNX29-207ENST00000568949 A0A096LNT2 108 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 CLOCKO15516 846 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 GPRIN2O60269 458 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 FADS1O60427 444 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 GSTA2P09210 222 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 ARL1P40616 181 aaPredicted RBP11.14□□□□□ -0.63
SNX29-207ENST00000568949 PAFAH1B1P43034 410 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 GNG11P61952 73 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 TRA2BP62995 288 aaKnown RBP11.14□□□□□ -0.63
SNX29-207ENST00000568949 GALNT1Q10472 559 aaPredicted RBP11.14□□□□□ -0.63
SNX29-207ENST00000568949 IFT88Q13099 833 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 ERCC6LQ2NKX8 1250 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 TMEM44Q2T9K0 475 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 CTU2Q2VPK5 515 aaKnown RBP11.14□□□□□ -0.63
SNX29-207ENST00000568949 ZNF672Q499Z4 452 aaPredicted RBP11.14□□□□□ -0.63
SNX29-207ENST00000568949 TTC19Q6DKK2 380 aaPredicted RBP11.14□□□□□ -0.63
SNX29-207ENST00000568949 GGNQ86UU5 652 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 SLC44A2Q8IWA5 706 aaPredicted RBP11.14□□□□□ -0.63
SNX29-207ENST00000568949 KLHL7Q8IXQ5 586 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 CENPLQ8N0S6 344 aaPredicted RBP11.14□□□□□ -0.63
SNX29-207ENST00000568949 SLC35F6Q8N357 371 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 OR52B6Q8NGF0 335 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 UHMK1Q8TAS1 419 aaKnown RBP11.14□□□□□ -0.63
SNX29-207ENST00000568949 KCTD4Q8WVF5 259 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 ATP6V1E2Q96A05 226 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 S100PBPQ96BU1 408 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 CDK15Q96Q40 435 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 NTMT1Q9BV86 223 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 TRIM31Q9BZY9 425 aa11.14□□□□□ -0.63
SNX29-207ENST00000568949 NOL11Q9H8H0 719 aaKnown RBP11.14□□□□□ -0.63
SNX29-207ENST00000568949 ANKRA2Q9H9E1 313 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms