RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 C17orf82Q86X59 251 aaPredicted RBP16.9■□□□□ 0.3
SMPD3-211ENST00000568373 IQCF1Q8N6M8 205 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 C9orf43Q8TAL5 461 aaPredicted RBP16.9■□□□□ 0.3
SMPD3-211ENST00000568373 PIK3R3Q92569 461 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 MCHR1Q99705 422 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 CDCA4Q9BXL8 241 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 SAP130Q9H0E3 1048 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 WNT16Q9UBV4 365 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 ABCA7Q8IZY2 2146 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 USP34Q70CQ2 3546 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 CENPVL1A0A0U1RR11 272 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 MED26O95402 600 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 PTHP01270 115 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 IL9P15248 144 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 RPS4Y1P22090 263 aaKnown RBP16.89■□□□□ 0.29
SMPD3-211ENST00000568373 ALDH4A1P30038 563 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 LSM3P62310 102 aaKnown RBP16.89■□□□□ 0.29
SMPD3-211ENST00000568373 SKP1P63208 163 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 MOGQ16653 247 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 SYT16Q17RD7 645 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 ZNF730Q6ZMV8 503 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 GNPDA2Q8TDQ7 276 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 CRELD1Q96HD1 420 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 HSPA12BQ96MM6 686 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 NELL2Q99435 816 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 SPAG17Q6Q759 2223 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 THADAQ6YHU6 1953 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 AQP9O43315 295 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 OR10H2O60403 315 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 OR5F1O95221 314 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 AK1P00568 194 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 GIPRP48546 466 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 VBP1P61758 197 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 HNRNPKP61978 463 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMPD3-211ENST00000568373 GINS1Q14691 196 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 PLAG1Q6DJT9 500 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 ZBTB46Q86UZ6 589 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 VWA5B2Q8N398 1253 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 TCEANCQ8N8B7 351 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 NDNFQ8TB73 568 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 GPR151Q8TDV0 419 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 RBCK1Q9BYM8 510 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 TVP23BQ9NYZ1 205 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 DNAJC27Q9NZQ0 273 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 NTNG1Q9Y2I2 539 aa16.89■□□□□ 0.29
SMPD3-211ENST00000568373 LMO7DNF2Z398 122 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 FOXS1O43638 330 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 KIAA0513O60268 411 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 CBX7O95931 251 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 DBIP07108 87 aaKnown RBP16.88■□□□□ 0.29
SMPD3-211ENST00000568373 RNH1P13489 461 aaKnown RBP16.88■□□□□ 0.29
SMPD3-211ENST00000568373 MLLT10P55197 1068 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 NXPH1P58417 271 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 CDK5Q00535 292 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 TSPAN31Q12999 210 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 MAPK14Q16539 360 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 OCLNQ16625 522 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 DECR1Q16698 335 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 DEFB133Q30KQ1 61 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 NIPAL1Q6NVV3 410 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 DGAT2L6Q6ZPD8 337 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 RRM2BQ7LG56 351 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 PRICKLE2Q7Z3G6 844 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 KIF18BQ86Y91 864 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 CROCCP3Q8IVE0 287 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 SIX5Q8N196 739 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 C1orf216Q8TAB5 229 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 ACOT11Q8WXI4 607 aaPredicted RBP16.88■□□□□ 0.29
SMPD3-211ENST00000568373 SLC41A3Q96GZ6 507 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 ZNF285Q96NJ3 590 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 POLDIP3Q9BY77 421 aaKnown RBP16.88■□□□□ 0.29
SMPD3-211ENST00000568373 HCN3Q9P1Z3 774 aa16.88■□□□□ 0.29
SMPD3-211ENST00000568373 M0R3G1 203 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 CNOT3O75175 753 aaKnown RBP16.87■□□□□ 0.29
SMPD3-211ENST00000568373 COQ9O75208 318 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 THY1P04216 161 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 ADRA2AP08913 450 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 GABRA3P34903 492 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 OMPP47874 163 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 PCYT1AP49585 367 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 NCS1P62166 190 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 MAP4K2Q12851 820 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 FAM53BQ14153 422 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 ZNF829Q3KNS6 432 aaPredicted RBP16.87■□□□□ 0.29
SMPD3-211ENST00000568373 GDF7Q7Z4P5 450 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 MEX3DQ86XN8 651 aaKnown RBP16.87■□□□□ 0.29
SMPD3-211ENST00000568373 NKAIN4Q8IVV8 208 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 SPEM1Q8N4L4 309 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 TOR1AIP2Q8NFQ8 470 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 PIGXQ8TBF5 258 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 HOXB13Q92826 284 aaPredicted RBP16.87■□□□□ 0.29
SMPD3-211ENST00000568373 RPL3LQ92901 407 aaKnown RBP16.87■□□□□ 0.29
SMPD3-211ENST00000568373 FBXO34Q9NWN3 711 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 TAS2R16Q9NYV7 291 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 PRKYO43930 277 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 NTN1O95631 604 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 NID1P14543 1247 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 GABRA4P48169 554 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 ZNF136P52737 540 aa16.87■□□□□ 0.29
SMPD3-211ENST00000568373 SMSP52788 366 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms