RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	METTL25	Q8N6Q8	603 aa		10.22	□□□□□ -0.77
TCF4-238	ENST00000568169	MAPK1IP1L	Q8NDC0	245 aa		10.22	□□□□□ -0.77
TCF4-238	ENST00000568169	PLPPR2	Q96GM1	343 aa		10.22	□□□□□ -0.77
TCF4-238	ENST00000568169	FAIM2	Q9BWQ8	316 aa		10.22	□□□□□ -0.77
TCF4-238	ENST00000568169	REG4	Q9BYZ8	158 aa		10.22	□□□□□ -0.77
TCF4-238	ENST00000568169	ZBTB26	Q9HCK0	441 aa		10.22	□□□□□ -0.77
TCF4-238	ENST00000568169	PPP4R1L	Q9P1A2	415 aa		10.22	□□□□□ -0.77
TCF4-238	ENST00000568169	SLC12A4	Q9UP95	1085 aa		10.22	□□□□□ -0.77
TCF4-238	ENST00000568169	ZNF780B	Q9Y6R6	833 aa		10.22	□□□□□ -0.77
TCF4-238	ENST00000568169	HEATR1	Q9H583	2144 aa	Known RBP	10.22	□□□□□ -0.77
TCF4-238	ENST00000568169	NBEAL1	Q6ZS30	2694 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	MALRD1	Q5VYJ5	2156 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	OR2M5	A3KFT3	312 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	OVOL3	O00110	214 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	SEC14L5	O43304	696 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	ZSCAN12	O43309	604 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	TLX2	O43763	284 aa	Predicted RBP	10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	SCO2	O43819	266 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	FADS1	O60427	444 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	IFNA2	P01563	188 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	FCGR2A	P12318	317 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	IL11	P20809	199 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	EVI2B	P34910	448 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	ALDH9A1	P49189	494 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	TRA2B	P62995	288 aa	Known RBP	10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	MRPS25	P82663	173 aa	Known RBP	10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	CALCOCO2	Q13137	446 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	VEZF1	Q14119	521 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	GANAB	Q14697	944 aa	Known RBP	10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	ETFDH	Q16134	617 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	EXOC3L2	Q2M3D2	409 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	GLYR1	Q49A26	553 aa	Predicted RBP	10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	TECRL	Q5HYJ1	363 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	KLC3	Q6P597	504 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	STAC2	Q6ZMT1	411 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	CCDC116	Q8IYX3	515 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	PTGR2	Q8N8N7	351 aa	Predicted RBP	10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	OR4N2	Q8NGD1	307 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	FBF1	Q8TES7	1133 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	TMEM158	Q8WZ71	300 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	KAT2A	Q92830	837 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	EFHD2	Q96C19	240 aa	Predicted RBP	10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	NSUN5	Q96P11	429 aa	Known RBP	10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	ERP44	Q9BS26	406 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	STMN4	Q9H169	189 aa	Predicted RBP	10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	DPH5	Q9H2P9	285 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	ELOVL6	Q9H5J4	265 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	BRF2	Q9HAW0	419 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	FOLH1B	Q9HBA9	442 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	FARSB	Q9NSD9	589 aa	Known RBP	10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	GRHL1	Q9NZI5	618 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	MED11	Q9P086	117 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	PCTP	Q9UKL6	214 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169	UTS2R	Q9UKP6	389 aa		10.21	□□□□□ -0.77
TCF4-238	ENST00000568169		A0A096LPK6	155 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	FAM187A	A6NFU0	413 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169		H3BML4	177 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	STX16-NPEPL1	H3BU86	382 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	STX16	O14662	325 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	CD5L	O43866	347 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	PLOD3	O60568	738 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	PDYN	P01213	254 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	ALDOA	P04075	364 aa	Known RBP	10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	STX2	P32856	288 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	IDUA	P35475	653 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	SLC6A8	P48029	635 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	RPS3A	P61247	264 aa	Known RBP	10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	RPS4X	P62701	263 aa	Known RBP	10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	PSG6	Q00889	435 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	ERCC6L	Q2NKX8	1250 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	TMEM44	Q2T9K0	475 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	MROH9	Q5TGP6	573 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	ADAM5	Q6NVV9	412 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	WFDC8	Q8IUA0	241 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	SLC44A2	Q8IWA5	706 aa	Predicted RBP	10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	C1orf52	Q8N6N3	182 aa	Known RBP	10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	OR4F6	Q8NGB9	312 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	OR5M1	Q8NGP8	315 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	OR9A2	Q8NGT5	310 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	OR6K3	Q8NGY3	331 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	AKAP1	Q92667	903 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	GFM2	Q969S9	779 aa	Known RBP	10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	RTN4R	Q9BZR6	473 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	OR10A4	Q9H209	315 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	PTGES2	Q9H7Z7	377 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	SDHAF3	Q9NRP4	125 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	LAMP3	Q9UQV4	416 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	EMC9	Q9Y3B6	208 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	SAR1B	Q9Y6B6	198 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	AP4B1	Q9Y6B7	739 aa		10.2	□□□□□ -0.78
TCF4-238	ENST00000568169	TP53	P04637	393 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	THBS1	P07996	1170 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	PAFAH1B1	P43034	410 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	MAGEA4	P43358	317 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	GUCY2D	Q02846	1103 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	SGCB	Q16585	318 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	CYP27C1	Q4G0S4	372 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	DNM1P46	Q6ZS02	220 aa		10.19	□□□□□ -0.78
TCF4-238	ENST00000568169	GGN	Q86UU5	652 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms