RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 CPN1P15169 458 aa17.06■□□□□ 0.32
IFT140-208ENST00000566818 HPCAL1P37235 193 aa17.06■□□□□ 0.32
IFT140-208ENST00000566818 RPL3P39023 403 aaKnown RBP17.06■□□□□ 0.32
IFT140-208ENST00000566818 CES4AQ5XG92 561 aa17.06■□□□□ 0.32
IFT140-208ENST00000566818 ANKRD26P1Q6NSI1 321 aa17.06■□□□□ 0.32
IFT140-208ENST00000566818 ZNF551Q7Z340 670 aaPredicted RBP17.06■□□□□ 0.32
IFT140-208ENST00000566818 R3HCC1LQ7Z5L2 792 aaKnown RBP17.06■□□□□ 0.32
IFT140-208ENST00000566818 CLHC1Q8NHS4 586 aa17.06■□□□□ 0.32
IFT140-208ENST00000566818 MBD3L2Q8NHZ7 208 aaPredicted RBP17.06■□□□□ 0.32
IFT140-208ENST00000566818 ZPLD1Q8TCW7 415 aa17.06■□□□□ 0.32
IFT140-208ENST00000566818 MTERF3Q96E29 417 aa17.06■□□□□ 0.32
IFT140-208ENST00000566818 PPP3R2Q96LZ3 170 aa17.06■□□□□ 0.32
IFT140-208ENST00000566818 TMEM109Q9BVC6 243 aa17.06■□□□□ 0.32
IFT140-208ENST00000566818 FAM120CQ9NX05 1096 aaKnown RBP17.06■□□□□ 0.32
IFT140-208ENST00000566818 SH3BP4Q9P0V3 963 aa17.06■□□□□ 0.32
IFT140-208ENST00000566818 FBXL2Q9UKC9 423 aa17.06■□□□□ 0.32
IFT140-208ENST00000566818 MRPS18CQ9Y3D5 142 aaKnown RBP17.06■□□□□ 0.32
IFT140-208ENST00000566818 TMEM233B4DJY2 109 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 IL33O95760 270 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 PRPS2P11908 318 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 DPP4P27487 766 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 GAS1P54826 345 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 MANFP55145 182 aaKnown RBP17.05■□□□□ 0.32
IFT140-208ENST00000566818 GFRA1P56159 465 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 WNT3P56703 355 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 PDE7AQ13946 482 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 GANABQ14697 944 aaKnown RBP17.05■□□□□ 0.32
IFT140-208ENST00000566818 KRT71Q3SY84 523 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 RFTN2Q52LD8 501 aaPredicted RBP17.05■□□□□ 0.32
IFT140-208ENST00000566818 OR5M10Q6IEU7 315 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 LRIG3Q6UXM1 1119 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 ZCCHC23Q6ZST2 131 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 SZRD1Q7Z422 152 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 CDH24Q86UP0 819 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 TRIM42Q8IWZ5 723 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 MREGQ8N565 214 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 RELL2Q8NC24 303 aaPredicted RBP17.05■□□□□ 0.32
IFT140-208ENST00000566818 NAXEQ8NCW5 288 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 CEP70Q8NHQ1 597 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 AGR3Q8TD06 166 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 CIDECQ96AQ7 238 aaPredicted RBP17.05■□□□□ 0.32
IFT140-208ENST00000566818 EQTNQ9NQ60 294 aa17.05■□□□□ 0.32
IFT140-208ENST00000566818 ACSS1Q9NUB1 689 aaPredicted RBP17.05■□□□□ 0.32
IFT140-208ENST00000566818 FOXD3Q9UJU5 478 aaPredicted RBP17.05■□□□□ 0.32
IFT140-208ENST00000566818 KDM4EB2RXH2 506 aaPredicted RBP17.04■□□□□ 0.32
IFT140-208ENST00000566818 ZWINTO95229 277 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 BCKDHAP12694 445 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 CHMP24386 653 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 UQCRC1P31930 480 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 OPRM1P35372 400 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 RFX3P48380 749 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 DSCR4P56555 118 aaPredicted RBP17.04■□□□□ 0.32
IFT140-208ENST00000566818 GAB1Q13480 694 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 ATP6AP1LQ52LC2 224 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 ARSKQ6UWY0 536 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 TMEM200AQ86VY9 491 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 CDRT4Q8N9R6 151 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 PPP1R14CQ8TAE6 165 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 RNASE6Q93091 150 aaKnown RBP17.04■□□□□ 0.32
IFT140-208ENST00000566818 ZFP3Q96NJ6 502 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 MS4A4EQ96PG1 132 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 TUBA1CQ9BQE3 449 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 TBL1XR1Q9BZK7 514 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 PTGES2Q9H7Z7 377 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 HHATLQ9HCP6 504 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.04■□□□□ 0.32
IFT140-208ENST00000566818 BAIAP2L1Q9UHR4 511 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 L3MBTL1Q9Y468 752 aa17.04■□□□□ 0.32
IFT140-208ENST00000566818 V9GYY5 206 aaPredicted RBP17.04■□□□□ 0.32
IFT140-208ENST00000566818 TACC2O95359 2948 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 PDZD2O15018 2839 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 SYT5O00445 386 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 FADS1O60427 444 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 BPGMP07738 259 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 CTSSP25774 331 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 GABRA3P34903 492 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 FRKP42685 505 aaPredicted RBP17.03■□□□□ 0.32
IFT140-208ENST00000566818 ZNF136P52737 540 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 DGKQP52824 942 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 PRKAG1P54619 331 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 DLX5P56178 289 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 KRTAP10-9P60411 292 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 SRYQ05066 204 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 STX5Q13190 355 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 UGT3A2Q3SY77 523 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 FBXL19-AS1Q494R0 122 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 ZNF385BQ569K4 471 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 XKR7Q5GH72 579 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 FADS6Q8N9I5 356 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 NUP43Q8NFH3 380 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 GPR151Q8TDV0 419 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 RMND5BQ96G75 393 aaPredicted RBP17.03■□□□□ 0.32
IFT140-208ENST00000566818 TM9SF2Q99805 663 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 ACBD3Q9H3P7 528 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 OTOGQ6ZRI0 2925 aa17.03■□□□□ 0.32
IFT140-208ENST00000566818 EEF1E1-BLOC1S5C9J1V9 151 aa17.02■□□□□ 0.32
IFT140-208ENST00000566818 SCAMP2O15127 329 aaKnown RBP17.02■□□□□ 0.32
IFT140-208ENST00000566818 RGS16O15492 202 aaPredicted RBP17.02■□□□□ 0.32
IFT140-208ENST00000566818 EEF1E1O43324 174 aaKnown RBP17.02■□□□□ 0.32
IFT140-208ENST00000566818 EMC8O43402 210 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms