RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 GPN3Q9UHW5 284 aaPredicted RBP16.4■□□□□ 0.22
HERC2-208ENST00000566635 CHST2Q9Y4C5 530 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 TESMINQ9Y4I5 508 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 PEX12O00623 359 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 PLD2O14939 933 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 KIAA0513O60268 411 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 E2F6O75461 281 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 AK1P00568 194 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 IFNW1P05000 195 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 RRM2P31350 389 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 DCTP40126 519 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 MAPK14Q16539 360 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 C3orf38Q5JPI3 329 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 PPP4R4Q6NUP7 873 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 C9orf40Q8IXQ3 194 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 TAAR9Q96RI9 348 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 BARD1Q99728 777 aaKnown RBP16.39■□□□□ 0.21
HERC2-208ENST00000566635 VCXQ9H320 206 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 Q9N2J8 555 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 CNOT11Q9UKZ1 510 aaKnown RBP16.39■□□□□ 0.21
HERC2-208ENST00000566635 ZNF443Q9Y2A4 671 aaPredicted RBP16.39■□□□□ 0.21
HERC2-208ENST00000566635 CCDC187A0A096LP49 1063 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 CLDN24A6NM45 220 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 C9orf172C9J069 976 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 FRS3O43559 492 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 BRINP1O60477 761 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 RASAL1O95294 804 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 FTH1P19P0C7X4 201 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 FUT4P22083 530 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 TRHRP34981 398 aaPredicted RBP16.39■□□□□ 0.21
HERC2-208ENST00000566635 KCNC4Q03721 635 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 ANKRD34AQ69YU3 496 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 ZNF517Q6ZMY9 492 aaPredicted RBP16.39■□□□□ 0.21
HERC2-208ENST00000566635 STK32CQ86UX6 486 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 C7orf57Q8NEG2 295 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 OR1N1Q8NGS0 311 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 METTL21AQ8WXB1 218 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 C8orf44Q96CB5 159 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 SLC46A1Q96NT5 459 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 BTBD9Q96Q07 612 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 GAL3ST4Q96RP7 486 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 MTHFD2LQ9H903 347 aaPredicted RBP16.39■□□□□ 0.21
HERC2-208ENST00000566635 WDR54Q9H977 334 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 KCNE5Q9UJ90 142 aa16.39■□□□□ 0.21
HERC2-208ENST00000566635 GPR55Q9Y2T6 319 aaPredicted RBP16.39■□□□□ 0.21
HERC2-208ENST00000566635 SAMHD1Q9Y3Z3 626 aaKnown RBP16.39■□□□□ 0.21
HERC2-208ENST00000566635 C7orf72A4D263 438 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 C9J4A7 227 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 G3V2T6 193 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 FOXD2O60548 495 aaPredicted RBP16.38■□□□□ 0.21
HERC2-208ENST00000566635 SEMA7AO75326 666 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 GANABQ14697 944 aaKnown RBP16.38■□□□□ 0.21
HERC2-208ENST00000566635 NCF4Q15080 339 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 DEF8Q6ZN54 512 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 ZNF836Q6ZNA1 936 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 PEX5LQ8IYB4 626 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 OR5K1Q8NHB7 308 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 ART5Q96L15 291 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 DDA1Q9BW61 102 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 NRSN2Q9GZP1 204 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 SAP130Q9H0E3 1048 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 FOXJ2Q9P0K8 574 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 OR10H1Q9Y4A9 318 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 ENPP4Q9Y6X5 453 aa16.38■□□□□ 0.21
HERC2-208ENST00000566635 AGAP5A6NIR3 686 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 LGI1O95970 557 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 RPS4Y1P22090 263 aaKnown RBP16.37■□□□□ 0.21
HERC2-208ENST00000566635 SPIBQ01892 262 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 EBPQ15125 230 aaKnown RBP16.37■□□□□ 0.21
HERC2-208ENST00000566635 ASCL5Q7RTU5 278 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 ZDHHC13Q8IUH4 622 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 WDR77Q9BQA1 342 aaPredicted RBP16.37■□□□□ 0.21
HERC2-208ENST00000566635 NXF5Q9H1B4 397 aaKnown RBP16.37■□□□□ 0.21
HERC2-208ENST00000566635 REEP1Q9H902 201 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 BATF3Q9NR55 127 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 RLIMQ9NVW2 624 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 RHCGQ9UBD6 479 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 COPS7AQ9UBW8 275 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 CBLCQ9ULV8 474 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 SAGE2PA6NJ88 616 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 UGT2B17O75795 530 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 SEC24DO94855 1032 aaPredicted RBP16.37■□□□□ 0.21
HERC2-208ENST00000566635 DKK1O94907 266 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 DLGAP3O95886 979 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 ITGA2P17301 1181 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 PRKAR1BP31321 381 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 PIGAP37287 484 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 FLYWCH1Q4VC44 716 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 PAPD4Q6PIY7 484 aaKnown RBP16.37■□□□□ 0.21
HERC2-208ENST00000566635 TMEM205Q6UW68 189 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 TIPARPQ7Z3E1 657 aaKnown RBP16.37■□□□□ 0.21
HERC2-208ENST00000566635 MARCH9Q86YJ5 346 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 CLIP4Q8N3C7 705 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 BCORP1Q8N888 145 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 MORN4Q8NDC4 146 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 MAGEE2Q8TD90 523 aaPredicted RBP16.37■□□□□ 0.21
HERC2-208ENST00000566635 ADIPOR1Q96A54 375 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 ZNF597Q96LX8 424 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 ZNF570Q96NI8 536 aa16.37■□□□□ 0.21
HERC2-208ENST00000566635 ZPBPQ9BS86 351 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms