RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 KCNS3Q9BQ31 491 aa17.48■□□□□ 0.39
MSLN-207ENST00000566549 MND1Q9BWT6 205 aa17.48■□□□□ 0.39
MSLN-207ENST00000566549 TAPBPLQ9BX59 468 aa17.48■□□□□ 0.39
MSLN-207ENST00000566549 GON4LQ3T8J9 2241 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 SCN2AQ99250 2005 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 AGAP5A6NIR3 686 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 C2orf74A8MZ97 194 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 ATXN8OSP0DMR3 200 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 GNSP15586 552 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 GSTM3P21266 225 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 LIMK1P53667 647 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 RHAGQ02094 409 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 SFSWAPQ12872 951 aaKnown RBP17.47■□□□□ 0.39
MSLN-207ENST00000566549 EXOSC7Q15024 291 aaKnown RBP17.47■□□□□ 0.39
MSLN-207ENST00000566549 LIPKQ5VXJ0 399 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 HEPHL1Q6MZM0 1159 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 SLC30A6Q6NXT4 461 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 SLC27A4Q6P1M0 643 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 ZNF836Q6ZNA1 936 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 NRMQ8IXM6 262 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 SLC44A3Q8N4M1 653 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 FAM26EQ8N5C1 309 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 SMRP1Q8NCR6 262 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 OR52I1Q8NGK6 324 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 RNF217Q8TC41 542 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 GNPDA2Q8TDQ7 276 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 MROQ9BYG7 248 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 RBCK1Q9BYM8 510 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 FBXO34Q9NWN3 711 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 MMP17Q9ULZ9 603 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 CLCA2Q9UQC9 943 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 ZNF10P21506 573 aaPredicted RBP17.47■□□□□ 0.39
MSLN-207ENST00000566549 ETV5P41161 510 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 RFX3P48380 749 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 ETV1P50549 477 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 SRSF5Q13243 272 aaKnown RBP17.47■□□□□ 0.39
MSLN-207ENST00000566549 GDF7Q7Z4P5 450 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 GALNT12Q8IXK2 581 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 BAHD1Q8TBE0 780 aaPredicted RBP17.47■□□□□ 0.39
MSLN-207ENST00000566549 TRMT61AQ96FX7 289 aaKnown RBP17.47■□□□□ 0.39
MSLN-207ENST00000566549 TOE1Q96GM8 510 aaKnown RBP17.47■□□□□ 0.39
MSLN-207ENST00000566549 SLC41A3Q96GZ6 507 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 QPCTLQ9NXS2 382 aa17.47■□□□□ 0.39
MSLN-207ENST00000566549 VCANP13611 3396 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 SGK494L7N484 410 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 TBX1O43435 398 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 GKN3PP0CG01 181 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 IFNA8P32881 189 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 S100A5P33763 92 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 OMPP47874 163 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 SEPHS1P49903 392 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 PPP5CP53041 499 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 MAPK14Q16539 360 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 TIMM50Q3ZCQ8 353 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 ZNF628Q5EBL2 1059 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 NIPAL1Q6NVV3 410 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 C19orf48Q6RUI8 117 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 USP53Q70EK8 1073 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 PEX5LQ8IYB4 626 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 NANOGP1Q8N7R0 232 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 PIGXQ8TBF5 258 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 RSC1A1Q92681 617 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 PHOX2BQ99453 314 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 C8orf33Q9H7E9 229 aaPredicted RBP17.46■□□□□ 0.39
MSLN-207ENST00000566549 CACYBPQ9HB71 228 aaKnown RBP17.46■□□□□ 0.39
MSLN-207ENST00000566549 SLC7A7Q9UM01 511 aa17.46■□□□□ 0.39
MSLN-207ENST00000566549 UBXN7O94888 489 aa17.46■□□□□ 0.38
MSLN-207ENST00000566549 IFNGR2P38484 337 aa17.46■□□□□ 0.38
MSLN-207ENST00000566549 RAB15P59190 212 aa17.46■□□□□ 0.38
MSLN-207ENST00000566549 TSPAN31Q12999 210 aa17.46■□□□□ 0.38
MSLN-207ENST00000566549 CCINQ13939 588 aa17.46■□□□□ 0.38
MSLN-207ENST00000566549 TBC1D25Q3MII6 688 aa17.46■□□□□ 0.38
MSLN-207ENST00000566549 FIGNL1Q6PIW4 674 aa17.46■□□□□ 0.38
MSLN-207ENST00000566549 CSNK1A1LQ8N752 337 aa17.46■□□□□ 0.38
MSLN-207ENST00000566549 GPBAR1Q8TDU6 330 aa17.46■□□□□ 0.38
MSLN-207ENST00000566549 CCDC3Q9BQI4 270 aa17.46■□□□□ 0.38
MSLN-207ENST00000566549 MTHFD2LQ9H903 347 aaPredicted RBP17.46■□□□□ 0.38
MSLN-207ENST00000566549 ANKHQ9HCJ1 492 aa17.46■□□□□ 0.38
MSLN-207ENST00000566549 POT1Q9NUX5 634 aa17.46■□□□□ 0.38
MSLN-207ENST00000566549 CCDC59Q9P031 241 aaKnown RBP17.46■□□□□ 0.38
MSLN-207ENST00000566549 FANCMQ8IYD8 2048 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 KRBA1A5PL33 1030 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 PEX12O00623 359 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 LRRTM2O43300 516 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 PRG2P13727 222 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 CDH3P22223 829 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 RABIFP47224 123 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 EIF2B5Q13144 721 aaKnown RBP17.45■□□□□ 0.38
MSLN-207ENST00000566549 SAMD14Q8IZD0 417 aaPredicted RBP17.45■□□□□ 0.38
MSLN-207ENST00000566549 TMEM203Q969S6 136 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 SDF2Q99470 211 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 GPR174Q9BXC1 333 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 MIR1-1HGQ9H1L0 117 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 TRIM45Q9H8W5 580 aaPredicted RBP17.45■□□□□ 0.38
MSLN-207ENST00000566549 PRAMEF26H0Y7S4 382 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 RAB36O95755 333 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 CT62P0C5K7 136 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 THEGLP0DJG4 465 aa17.45■□□□□ 0.38
MSLN-207ENST00000566549 GTF2E2P29084 291 aaKnown RBP17.45■□□□□ 0.38
MSLN-207ENST00000566549 UBE2IP63279 158 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms