RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 GNA13Q14344 377 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 ZNF630Q2M218 657 aaPredicted RBP13.65□□□□□ -0.22
SPG7-213ENST00000566221 ARHGAP11BQ3KRB8 267 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 SAMD4BQ5PRF9 694 aaKnown RBP13.65□□□□□ -0.22
SPG7-213ENST00000566221 ERICH5Q6P6B1 374 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 OPN5Q6U736 354 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 ISLR2Q6UXK2 745 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 C16orf47Q6ZP98 133 aaPredicted RBP13.65□□□□□ -0.22
SPG7-213ENST00000566221 CALHM3Q86XJ0 350 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 PRR22Q8IZ63 422 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 METTL25Q8N6Q8 603 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 BCORP1Q8N888 145 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 C11orf65Q8NCR3 313 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 ASB15Q8WXK1 588 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 TMBIM1Q969X1 311 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 OMA1Q96E52 524 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 TRNT1Q96Q11 434 aaKnown RBP13.65□□□□□ -0.22
SPG7-213ENST00000566221 LMF1Q96S06 567 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 CDRT15Q96T59 188 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 THTPAQ9BU02 230 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 G6PC3Q9BUM1 346 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 ALG2Q9H553 416 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 POLE3Q9NRF9 147 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 CALML5Q9NZT1 146 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 NPFFR2Q9Y5X5 522 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 KCNE3Q9Y6H6 103 aa13.65□□□□□ -0.22
SPG7-213ENST00000566221 LAMA5O15230 3695 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 MAN1A2O60476 641 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 ABCB7O75027 752 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 PPM1BO75688 479 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 IL33O95760 270 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 BCHEP06276 602 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 NUDT7P0C024 238 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 FBXO45P0C2W1 286 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 NR2F1P10589 423 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 NAGAP17050 411 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 LCN1P31025 176 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 CASRP41180 1078 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 SOX3P41225 446 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 GZMMP51124 257 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 CRISP3P54108 245 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 LIPEQ05469 1076 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 MFAP5Q13361 173 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 TBR1Q16650 682 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.64□□□□□ -0.23
SPG7-213ENST00000566221 GPAT3Q53EU6 434 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 PGM2L1Q6PCE3 622 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 PTOV1Q86YD1 416 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 SLC30A8Q8IWU4 369 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 GPALPP1Q8IXQ4 340 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 ZZZ3Q8IYH5 903 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 BEST3Q8N1M1 668 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 FBXW8Q8N3Y1 598 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 TMEM156Q8N614 296 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 FDCSPQ8NFU4 85 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 OR2T12Q8NG77 320 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 OR4N2Q8NGD1 307 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 FAM110BQ8TC76 370 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 DIO2Q92813 273 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 SPACA9Q96E40 222 aaPredicted RBP13.64□□□□□ -0.23
SPG7-213ENST00000566221 REXO5Q96IC2 774 aaKnown RBP13.64□□□□□ -0.23
SPG7-213ENST00000566221 ZNF583Q96ND8 569 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 KCTD14Q9BQ13 255 aaPredicted RBP13.64□□□□□ -0.23
SPG7-213ENST00000566221 ZNF552Q9H707 407 aaPredicted RBP13.64□□□□□ -0.23
SPG7-213ENST00000566221 ZNF451Q9Y4E5 1061 aa13.64□□□□□ -0.23
SPG7-213ENST00000566221 PCDHGA9Q9Y5G4 932 aaKnown RBP13.64□□□□□ -0.23
SPG7-213ENST00000566221 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.64□□□□□ -0.23
SPG7-213ENST00000566221 OR6C70A6NIJ9 312 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 C5orf58C9J3I9 102 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 MKRN2OSH3BPM6 223 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 SLC28A2O43868 658 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 HS6ST1O60243 411 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 TSPAN2O60636 221 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 ZNF354AO60765 605 aaPredicted RBP13.63□□□□□ -0.23
SPG7-213ENST00000566221 STX11O75558 287 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 REM1O75628 298 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 GUSBP08236 651 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 TFPTP0C1Z6 253 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 HSD17B1P14061 328 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 ATP6V1C1P21283 382 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 PCGF2P35227 344 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 RFX3P48380 749 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 GSK3BP49841 420 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 PNLIPRP2P54317 469 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 KCNJ2P63252 427 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 CDK6Q00534 326 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 C19orf57Q0VDD7 668 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 SCARB2Q14108 478 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 EFR3AQ14156 821 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 ADRM1Q16186 407 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 SYPL1Q16563 259 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 VMACQ2NL98 169 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 CCNJQ5T5M9 372 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 PRAMEF8Q5VWM4 474 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 PRAMEF7Q5VXH5 474 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 FIGNL1Q6PIW4 674 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 LYPD8Q6UX82 237 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 LRRC74BQ6ZQY2 392 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 C10orf67Q8IYJ2 551 aa13.63□□□□□ -0.23
SPG7-213ENST00000566221 ULK2Q8IYT8 1036 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms