RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 EVPLLA8MZ36 301 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 CBX6O95503 412 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 PIGAP37287 484 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 RPP38P78345 283 aaKnown RBP23.87■■□□□ 1.41
NME3-208ENST00000565379 OC90Q02509 493 aaPredicted RBP23.87■■□□□ 1.41
NME3-208ENST00000565379 PLCXD2Q0VAA5 305 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 FADDQ13158 208 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 TUBA3CQ13748 450 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 DUSP5Q16690 384 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 TUBA3EQ6PEY2 450 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 RNF130Q86XS8 419 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 POU5F2Q8N7G0 328 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 COX18Q8N8Q8 333 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 GOLM1Q8NBJ4 401 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 PRR7Q8TB68 274 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 SPACA9Q96E40 222 aaPredicted RBP23.87■■□□□ 1.41
NME3-208ENST00000565379 OR7D2Q96RA2 312 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 CGREF1Q99674 301 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 YIPF4Q9BSR8 244 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 BTBD2Q9BX70 525 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 SLC25A37Q9NYZ2 338 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 VAPAQ9P0L0 249 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 SLAMF8Q9P0V8 285 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.87■■□□□ 1.41
NME3-208ENST00000565379 TAGLN3Q9UI15 199 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 DOPEY1Q5JWR5 2465 aa23.87■■□□□ 1.41
NME3-208ENST00000565379 PPM1BO75688 479 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 LCN1P31025 176 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 CD96P40200 585 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 SOX3P41225 446 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 MNAT1P51948 309 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 ZNF169Q14929 603 aaPredicted RBP23.86■■□□□ 1.41
NME3-208ENST00000565379 NNATQ16517 81 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 ZNF791Q3KP31 576 aaPredicted RBP23.86■■□□□ 1.41
NME3-208ENST00000565379 GTDC1Q4AE62 458 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 RUNDC3AQ59EK9 446 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 ATAD3BQ5T9A4 648 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 LYPD8Q6UX82 237 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 RTL4Q6ZR62 310 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 LRRC58Q96CX6 371 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 RCN3Q96D15 328 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 OMA1Q96E52 524 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 ANKRD27Q96NW4 1050 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 SECISBP2Q96T21 854 aaKnown RBP23.86■■□□□ 1.41
NME3-208ENST00000565379 BARD1Q99728 777 aaKnown RBP23.86■■□□□ 1.41
NME3-208ENST00000565379 G6PC3Q9BUM1 346 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 OR51I1Q9H343 314 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 LRFN1Q9P244 771 aa23.86■■□□□ 1.41
NME3-208ENST00000565379 OR6C70A6NIJ9 312 aa23.85■■□□□ 1.41
NME3-208ENST00000565379 TP53I11O14683 189 aa23.85■■□□□ 1.41
NME3-208ENST00000565379 NME6O75414 186 aaPredicted RBP23.85■■□□□ 1.41
NME3-208ENST00000565379 OR6B1O95007 311 aa23.85■■□□□ 1.41
NME3-208ENST00000565379 ST13P50502 369 aaKnown RBP23.85■■□□□ 1.41
NME3-208ENST00000565379 PNLIPRP2P54317 469 aa23.85■■□□□ 1.41
NME3-208ENST00000565379 POU6F2P78424 691 aaPredicted RBP23.85■■□□□ 1.41
NME3-208ENST00000565379 ART3Q13508 389 aa23.85■■□□□ 1.41
NME3-208ENST00000565379 EFR3AQ14156 821 aa23.85■■□□□ 1.41
NME3-208ENST00000565379 NTRK2Q16620 822 aa23.85■■□□□ 1.41
NME3-208ENST00000565379 HACD2Q6Y1H2 254 aa23.85■■□□□ 1.41
NME3-208ENST00000565379 NUP54Q7Z3B4 507 aa23.85■■□□□ 1.41
NME3-208ENST00000565379 MSRB3Q8IXL7 192 aa23.85■■□□□ 1.41
NME3-208ENST00000565379 CYP4Z2PQ8N1L4 340 aa23.85■■□□□ 1.41
NME3-208ENST00000565379 TMEM125Q96AQ2 219 aa23.85■■□□□ 1.41
NME3-208ENST00000565379 SLC35A4Q96G79 324 aa23.85■■□□□ 1.41
NME3-208ENST00000565379 PCDHGB6Q9Y5F9 930 aa23.85■■□□□ 1.41
NME3-208ENST00000565379 UNC79Q9P2D8 2635 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 CPAMD8Q8IZJ3 1885 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 C15orf38-AP3S2A0A0A6YYH1 394 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 TRAV17A0A0B4J275 112 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 ZNF354AO60765 605 aaPredicted RBP23.84■■□□□ 1.41
NME3-208ENST00000565379 REM1O75628 298 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 IL12BP29460 328 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 TNFSF10P50591 281 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 RGNQ15493 299 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 OR1C1Q15619 314 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 IL20RBQ6UXL0 311 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 TRPM8Q7Z2W7 1104 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 WDR53Q7Z5U6 358 aaPredicted RBP23.84■■□□□ 1.41
NME3-208ENST00000565379 ARPINQ7Z6K5 226 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 OR8J3Q8NGG0 315 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 FBXO30Q8TB52 745 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 FAM110BQ8TC76 370 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 GRHL3Q8TE85 626 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 DIO2Q92813 273 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 TMBIM1Q969X1 311 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 COL21A1Q96P44 957 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.84■■□□□ 1.41
NME3-208ENST00000565379 SERHL2Q9H4I8 314 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 TIMMDC1Q9NPL8 285 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 LIPT1Q9Y234 373 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 AP3M1Q9Y2T2 418 aa23.84■■□□□ 1.41
NME3-208ENST00000565379 AIM2O14862 343 aa23.83■■□□□ 1.41
NME3-208ENST00000565379 TSPAN2O60636 221 aa23.83■■□□□ 1.41
NME3-208ENST00000565379 UNC5CO95185 931 aa23.83■■□□□ 1.41
NME3-208ENST00000565379 IL33O95760 270 aa23.83■■□□□ 1.41
NME3-208ENST00000565379 GUSBP08236 651 aa23.83■■□□□ 1.41
NME3-208ENST00000565379 CD46P15529 392 aa23.83■■□□□ 1.41
NME3-208ENST00000565379 GPX2P18283 190 aa23.83■■□□□ 1.41
NME3-208ENST00000565379 CRATP43155 626 aa23.83■■□□□ 1.41
NME3-208ENST00000565379 MVDP53602 400 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms