RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 STK25O00506 426 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 ADAP00813 363 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 EPHX1P07099 455 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 PTNP21246 168 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 DGCR2P98153 550 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 SPIN4Q56A73 249 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 PRSS45Q7RTY3 260 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 COMTD1Q86VU5 262 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 TMEM25Q86YD3 366 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 CHCHD4Q8N4Q1 142 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 LILRA3Q8N6C8 439 aaPredicted RBP15.3■□□□□ 0.04
LINC00554-201ENST00000564841 PLA2G15Q8NCC3 412 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 ATOH1Q92858 354 aaPredicted RBP15.3■□□□□ 0.04
LINC00554-201ENST00000564841 GCDHQ92947 438 aaPredicted RBP15.3■□□□□ 0.04
LINC00554-201ENST00000564841 TRMT2BQ96GJ1 504 aaKnown RBP15.3■□□□□ 0.04
LINC00554-201ENST00000564841 DPH7Q9BTV6 452 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 TMEM106CQ9BVX2 250 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 LDAHQ9H6V9 325 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 IL20RAQ9UHF4 553 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 OR2AG2A6NM03 316 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 GRXCR1A8MXD5 290 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 LEFTY2O00292 366 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 EN2P19622 333 aaPredicted RBP15.3■□□□□ 0.04
LINC00554-201ENST00000564841 PRPH2P23942 346 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 SHC1P29353 583 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 MLLT1Q03111 559 aaPredicted RBP15.3■□□□□ 0.04
LINC00554-201ENST00000564841 TEAD2Q15562 447 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 C3P1Q6ZMU1 363 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 IZUMO1Q8IYV9 350 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 L3MBTL4Q8NA19 623 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 WDR48Q8TAF3 677 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 SORCS1Q8WY21 1168 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 HGDQ93099 445 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 GIMAP5Q96F15 307 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 ARHGAP9Q9BRR9 750 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 ZBP1Q9H171 429 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 SLC6A17Q9H1V8 727 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 OSGEPL1Q9H4B0 414 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 FANCFQ9NPI8 374 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 FBXW2Q9UKT8 454 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 PDCD5O14737 125 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 PTP4A3O75365 173 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 BCHEP06276 602 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 ADH1AP07327 375 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 SULT1A3P0DMM9 295 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 SULT1A4P0DMN0 295 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 CTSAP10619 480 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 PSMA3P25788 255 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 PPM1AP35813 382 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 GIPRP48546 466 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 ELOAQ14241 798 aaKnown RBP15.3■□□□□ 0.04
LINC00554-201ENST00000564841 VASNQ6EMK4 673 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 KIAA1161Q6NSJ0 714 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 MZT2AQ6P582 158 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 SYT9Q86SS6 491 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 KLBQ86Z14 1044 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 CNOT9Q92600 299 aaKnown RBP15.3■□□□□ 0.04
LINC00554-201ENST00000564841 SCAMP4Q969E2 229 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 ZNF707Q96C28 371 aaPredicted RBP15.3■□□□□ 0.04
LINC00554-201ENST00000564841 MED8Q96G25 268 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 MTG2Q9H4K7 406 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 IFT22Q9H7X7 185 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 BTNL2Q9UIR0 455 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 RUVBL1Q9Y265 456 aaKnown RBP15.3■□□□□ 0.04
LINC00554-201ENST00000564841 RASD1Q9Y272 281 aa15.3■□□□□ 0.04
LINC00554-201ENST00000564841 CHD5Q8TDI0 1954 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 TRDV1A0A1B0GX56 115 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 A8MVJ9 347 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 B3GALNT1O75752 331 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 FGF9P31371 208 aaPredicted RBP15.29■□□□□ 0.04
LINC00554-201ENST00000564841 ZNF169Q14929 603 aaPredicted RBP15.29■□□□□ 0.04
LINC00554-201ENST00000564841 OCLNQ16625 522 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 LRRTM4Q86VH4 590 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 OR52N2Q8NGI0 321 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 OR4K3Q96R72 315 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 SECISBP2Q96T21 854 aaKnown RBP15.29■□□□□ 0.04
LINC00554-201ENST00000564841 TAS2R7Q9NYW3 318 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 ZNF282Q9UDV7 671 aaPredicted RBP15.29■□□□□ 0.04
LINC00554-201ENST00000564841 POMT2Q9UKY4 750 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 ZNF593O00488 134 aaPredicted RBP15.29■□□□□ 0.04
LINC00554-201ENST00000564841 ZNF8P17098 575 aaPredicted RBP15.29■□□□□ 0.04
LINC00554-201ENST00000564841 MMP11P24347 488 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 ACRV1P26436 265 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 PFN3P60673 137 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 CCSMST1Q4G0I0 132 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 RETSATQ6NUM9 610 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 CHST9Q7L1S5 443 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 ZER1Q7Z7L7 766 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 SLC38A2Q96QD8 506 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 OR2M2Q96R28 347 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 ZNF436Q9C0F3 470 aaPredicted RBP15.29■□□□□ 0.04
LINC00554-201ENST00000564841 TMEM168Q9H0V1 697 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 ISG20L2Q9H9L3 353 aaKnown RBP15.29■□□□□ 0.04
LINC00554-201ENST00000564841 DNAJC11Q9NVH1 559 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 SCP2D1Q9UJQ7 156 aa15.29■□□□□ 0.04
LINC00554-201ENST00000564841 SIRT4Q9Y6E7 314 aaPredicted RBP15.29■□□□□ 0.04
LINC00554-201ENST00000564841 ANXA2P2A6NMY6 339 aa15.28■□□□□ 0.04
LINC00554-201ENST00000564841 DNASE2O00115 360 aaPredicted RBP15.28■□□□□ 0.04
LINC00554-201ENST00000564841 GREM1O60565 184 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms