RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 PSPHP78330 225 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 FUT5Q11128 374 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 SELPLGQ14242 412 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 MAPK11Q15759 364 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 SLC6A19Q695T7 634 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 NANOGP8Q6NSW7 305 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 FIGNL1Q6PIW4 674 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 GPALPP1Q8IXQ4 340 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 COX18Q8N8Q8 333 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 Q8NA96 180 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 GOLM1Q8NBJ4 401 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 PAQR8Q8TEZ7 354 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 XAGE5Q8WWM1 108 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 BTBD2Q9BX70 525 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.46□□□□□ -0.58
KARS-204ENST00000564578 NANOGQ9H9S0 305 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 PROK2Q9HC23 129 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 COL6A6A6NMZ7 2263 aa11.46□□□□□ -0.58
KARS-204ENST00000564578 ADAM10O14672 748 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 FCMRO60667 390 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 SOX30O94993 753 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 IL33O95760 270 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 SP1P08047 785 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 KRT16P08779 473 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 NUDT7P0C024 238 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 CASRP41180 1078 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 CRATP43155 626 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 TMED10P49755 219 aaKnown RBP11.45□□□□□ -0.58
KARS-204ENST00000564578 PNLIPRP2P54317 469 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 MTPNP58546 118 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 POU6F2P78424 691 aaPredicted RBP11.45□□□□□ -0.58
KARS-204ENST00000564578 CBX1P83916 185 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 DECR1Q16698 335 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 COLEC12Q5KU26 742 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 DCST2Q5T1A1 773 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 AP1ARQ63HQ0 302 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 C8orf82Q6P1X6 216 aaPredicted RBP11.45□□□□□ -0.58
KARS-204ENST00000564578 RTL4Q6ZR62 310 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 OLIG3Q7RTU3 272 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 DND1Q8IYX4 353 aaKnown RBP11.45□□□□□ -0.58
KARS-204ENST00000564578 PCYOX1LQ8NBM8 494 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 PSD4Q8NDX1 1056 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 FAM13CQ8NE31 585 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 CHDHQ8NE62 594 aaPredicted RBP11.45□□□□□ -0.58
KARS-204ENST00000564578 OR4C3Q8NH37 302 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 RNF138Q8WVD3 245 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 NTNG2Q96CW9 530 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 SCMH1Q96GD3 660 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 COL21A1Q96P44 957 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 NODALQ96S42 347 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 SDF2Q99470 211 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 GPATCH1Q9BRR8 931 aaKnown RBP11.45□□□□□ -0.58
KARS-204ENST00000564578 KLHL1Q9NR64 748 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 DEPPQ9NTK1 212 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 FLRT3Q9NZU0 649 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.45□□□□□ -0.58
KARS-204ENST00000564578 EML6Q6ZMW3 1958 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 EXPH5Q8NEV8 1989 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 TRAV17A0A0B4J275 112 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 TNFRSF21O75509 655 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 CBX6O95503 412 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 T-ENOLP0DO92 83 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 BMP2P12643 396 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 SLC6A2P23975 617 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 MAGEA8P43361 318 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 CPA2P48052 419 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 RFX3P48380 749 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 KHKP50053 298 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 GABPB1Q06547 395 aaPredicted RBP11.45□□□□□ -0.58
KARS-204ENST00000564578 FOXD4Q12950 439 aaPredicted RBP11.45□□□□□ -0.58
KARS-204ENST00000564578 KRT72Q14CN4 511 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 ADRM1Q16186 407 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.45□□□□□ -0.58
KARS-204ENST00000564578 ARHGAP11BQ3KRB8 267 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 ZNF766Q5HY98 468 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 RABL3Q5HYI8 236 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 SLC22A10Q63ZE4 541 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 BICRALQ6AI39 1079 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 SLC25A25Q6KCM7 469 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 NUP54Q7Z3B4 507 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 PTRH1Q86Y79 214 aaKnown RBP11.45□□□□□ -0.58
KARS-204ENST00000564578 LSM14AQ8ND56 463 aaKnown RBP11.45□□□□□ -0.58
KARS-204ENST00000564578 FBXO27Q8NI29 283 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 RTN4RQ9BZR6 473 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 EFCAB1Q9HAE3 211 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 CNOT11Q9UKZ1 510 aaKnown RBP11.45□□□□□ -0.58
KARS-204ENST00000564578 PCDHGB6Q9Y5F9 930 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 PCDHGB3Q9Y5G1 929 aa11.45□□□□□ -0.58
KARS-204ENST00000564578 NINQ8N4C6 2090 aa11.44□□□□□ -0.58
KARS-204ENST00000564578 A0A0G2JMM0 328 aa11.44□□□□□ -0.58
KARS-204ENST00000564578 A0A1W2PPB8 328 aa11.44□□□□□ -0.58
KARS-204ENST00000564578 A0A1W2PRS3 328 aa11.44□□□□□ -0.58
KARS-204ENST00000564578 KIR3DP1A8MWS1 328 aa11.44□□□□□ -0.58
KARS-204ENST00000564578 TPD52L2O43399 206 aaKnown RBP11.44□□□□□ -0.58
KARS-204ENST00000564578 NME2P1O60361 137 aa11.44□□□□□ -0.58
KARS-204ENST00000564578 ABCB7O75027 752 aa11.44□□□□□ -0.58
KARS-204ENST00000564578 TFPTP0C1Z6 253 aa11.44□□□□□ -0.58
KARS-204ENST00000564578 CYP4B1P13584 511 aa11.44□□□□□ -0.58
KARS-204ENST00000564578 NME2P22392 152 aa11.44□□□□□ -0.58
KARS-204ENST00000564578 PTGDSP41222 190 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms