RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CENPSQ8N2Z9 138 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 COLGALT1Q8NBJ5 622 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 ZNF397Q8NF99 534 aaPredicted RBP3.02□□□□□ -1.93
UBR1-205ENST00000564540 RSPH1Q8WYR4 309 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 GLT8D2Q9H1C3 349 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 C2orf40Q9H1Z8 148 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 ABCG8Q9H221 673 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 DCAF13Q9NV06 445 aaKnown RBP3.02□□□□□ -1.93
UBR1-205ENST00000564540 ARGLU1Q9NWB6 273 aaPredicted RBP3.02□□□□□ -1.93
UBR1-205ENST00000564540 FAM153AQ9UHL3 310 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 FKBP7Q9Y680 259 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 USP6P35125 1406 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 MACROD2A1Z1Q3 448 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 TRIM64A6NGJ6 449 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 TRIM64BA6NI03 449 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 RSPH10B2B2RC85 870 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 BUB1O43683 1085 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 STK17BO94768 372 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 RSPH10BP0C881 870 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 ZNF18P17022 549 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 CASP9P55211 416 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 UBXN1Q04323 297 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 HACD2Q6Y1H2 254 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 IL34Q6ZMJ4 242 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 YRDCQ86U90 279 aaKnown RBP3.01□□□□□ -1.93
UBR1-205ENST00000564540 IQCA1Q86XH1 822 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 SNX21Q969T3 373 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 DTD2Q96FN9 168 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 NOL4LQ96MY1 436 aaPredicted RBP3.01□□□□□ -1.93
UBR1-205ENST00000564540 IL4I1Q96RQ9 567 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 CARD6Q9BX69 1037 aa3.01□□□□□ -1.93
UBR1-205ENST00000564540 FAM124BQ9H5Z6 455 aaPredicted RBP3.01□□□□□ -1.93
UBR1-205ENST00000564540 ZMYM6O95789 1325 aa3□□□□□ -1.93
UBR1-205ENST00000564540 HTATSF1O43719 755 aaKnown RBP3□□□□□ -1.93
UBR1-205ENST00000564540 IGFBP1P08833 259 aaPredicted RBP3□□□□□ -1.93
UBR1-205ENST00000564540 CASP3P42574 277 aa3□□□□□ -1.93
UBR1-205ENST00000564540 RPL32P62910 135 aaKnown RBP3□□□□□ -1.93
UBR1-205ENST00000564540 ORC2Q13416 577 aaPredicted RBP3□□□□□ -1.93
UBR1-205ENST00000564540 DPYSQ14117 519 aa3□□□□□ -1.93
UBR1-205ENST00000564540 OR2B11Q5JQS5 317 aa3□□□□□ -1.93
UBR1-205ENST00000564540 CXCL17Q6UXB2 119 aa3□□□□□ -1.93
UBR1-205ENST00000564540 PP632Q6XCG6 107 aa3□□□□□ -1.93
UBR1-205ENST00000564540 TOM1L2Q6ZVM7 507 aa3□□□□□ -1.93
UBR1-205ENST00000564540 GPBP1Q86WP2 473 aa3□□□□□ -1.93
UBR1-205ENST00000564540 ARL10Q8N8L6 244 aa3□□□□□ -1.93
UBR1-205ENST00000564540 NFAM1Q8NET5 270 aaPredicted RBP3□□□□□ -1.93
UBR1-205ENST00000564540 BBS1Q8NFJ9 593 aa3□□□□□ -1.93
UBR1-205ENST00000564540 CCDC51Q96ER9 411 aa3□□□□□ -1.93
UBR1-205ENST00000564540 PTGES2Q9H7Z7 377 aa3□□□□□ -1.93
UBR1-205ENST00000564540 DBNDD1Q9H9R9 158 aa3□□□□□ -1.93
UBR1-205ENST00000564540 TRMT6Q9UJA5 497 aaKnown RBP3□□□□□ -1.93
UBR1-205ENST00000564540 ISY1Q9ULR0 285 aaKnown RBP3□□□□□ -1.93
UBR1-205ENST00000564540 FZR1Q9UM11 496 aa3□□□□□ -1.93
UBR1-205ENST00000564540 DUSP12Q9UNI6 340 aa3□□□□□ -1.93
UBR1-205ENST00000564540 RAD54L2Q9Y4B4 1467 aa3□□□□□ -1.93
UBR1-205ENST00000564540 TMEM89A2RUT3 159 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 HMOX1P09601 288 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 PSG2P11465 335 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 GNSP15586 552 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 PPP1R8Q12972 351 aaKnown RBP2.99□□□□□ -1.93
UBR1-205ENST00000564540 MORF4L2Q15014 288 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 BEND6Q5SZJ8 279 aaPredicted RBP2.99□□□□□ -1.93
UBR1-205ENST00000564540 FRA10AC1Q70Z53 315 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 HSD17B13Q7Z5P4 300 aaPredicted RBP2.99□□□□□ -1.93
UBR1-205ENST00000564540 ZNF433Q8N7K0 673 aaPredicted RBP2.99□□□□□ -1.93
UBR1-205ENST00000564540 LINC01555Q8NAE3 123 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 ARNTL2Q8WYA1 636 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 ZNF560Q96MR9 790 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 NAP1L5Q96NT1 182 aaPredicted RBP2.99□□□□□ -1.93
UBR1-205ENST00000564540 CBWD1Q9BRT8 395 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 CNPY3Q9BT09 278 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 OR51J1Q9H342 316 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 ZNF331Q9NQX6 463 aaPredicted RBP2.99□□□□□ -1.93
UBR1-205ENST00000564540 PNO1Q9NRX1 252 aaKnown RBP2.99□□□□□ -1.93
UBR1-205ENST00000564540 MTRRQ9UBK8 725 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 KLK12Q9UKR0 248 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 L3MBTL1Q9Y468 752 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 METP08581 1390 aa2.99□□□□□ -1.93
UBR1-205ENST00000564540 A0A0U1RRA0 63 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 C19orf81C9J6K1 198 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 E9PLD3 99 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 IMPA2O14732 288 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 MMP23AO75900 390 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 BAG2O95816 211 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 HPNP05981 417 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 CCNE1P24864 410 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 HNRNPFP52597 415 aaKnown RBP2.98□□□□□ -1.93
UBR1-205ENST00000564540 BPIFB3P59826 476 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 NME3Q13232 169 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 TSTA3Q13630 321 aaPredicted RBP2.98□□□□□ -1.93
UBR1-205ENST00000564540 PKN2Q16513 984 aaKnown RBP2.98□□□□□ -1.93
UBR1-205ENST00000564540 CYP51A1Q16850 503 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 ACSF3Q4G176 576 aaPredicted RBP2.98□□□□□ -1.93
UBR1-205ENST00000564540 IRGCQ6NXR0 463 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 DLEU7Q6UYE1 221 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 CCDC36Q8IYA8 594 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 C10orf53Q8N6V4 93 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 LRRC17Q8N6Y2 441 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 MSANTD4Q8NCY6 345 aa2.98□□□□□ -1.93
UBR1-205ENST00000564540 MGARPQ8TDB4 240 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms