RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 CT45A2Q5DJT8 189 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 HLA-DQA1Q5Y7H0 255 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 LURAP1LQ8IV03 231 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 SLC44A2Q8IWA5 706 aaPredicted RBP11.95□□□□□ -0.5
SPG7-209ENST00000564047 COX18Q8N8Q8 333 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 ZNF441Q8N8Z8 693 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 ZSCAN1Q8NBB4 408 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 CHDHQ8NE62 594 aaPredicted RBP11.95□□□□□ -0.5
SPG7-209ENST00000564047 HIPK4Q8NE63 616 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 GPR151Q8TDV0 419 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 SLC38A5Q8WUX1 472 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 CDS1Q92903 461 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 MAL2Q969L2 176 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 CCDC124Q96CT7 223 aaKnown RBP11.95□□□□□ -0.5
SPG7-209ENST00000564047 OTUB1Q96FW1 271 aaPredicted RBP11.95□□□□□ -0.5
SPG7-209ENST00000564047 LCORQ96JN0 433 aaPredicted RBP11.95□□□□□ -0.5
SPG7-209ENST00000564047 ZNF184Q99676 751 aaPredicted RBP11.95□□□□□ -0.5
SPG7-209ENST00000564047 BTBD2Q9BX70 525 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 WWTR1Q9GZV5 400 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 MAGEL2Q9UJ55 1249 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 FBXL4Q9UKA2 621 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 SNX13Q9Y5W8 968 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 KCNE3Q9Y6H6 103 aa11.95□□□□□ -0.5
SPG7-209ENST00000564047 SCN2AQ99250 2005 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 PRAMEF27A3QJZ7 478 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 C5orf58C9J3I9 102 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 ACOT8O14734 319 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 TO15178 435 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 GSTA4O15217 222 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 GMNNO75496 209 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 STAMBPO95630 424 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 BCHEP06276 602 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 GUSBP08236 651 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 NR2F1P10589 423 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 MSX2P35548 267 aaPredicted RBP11.94□□□□□ -0.5
SPG7-209ENST00000564047 CRISP3P54108 245 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 POU6F2P78424 691 aaPredicted RBP11.94□□□□□ -0.5
SPG7-209ENST00000564047 MS4A2Q01362 244 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 FUT5Q11128 374 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 ATP1A4Q13733 1029 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 BLMHQ13867 455 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 MAPK11Q15759 364 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 SYPL1Q16563 259 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 ARHGAP11BQ3KRB8 267 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 CYP27C1Q4G0S4 372 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 INTS11Q5TA45 600 aaKnown RBP11.94□□□□□ -0.5
SPG7-209ENST00000564047 PRAMEF8Q5VWM4 474 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 PRAMEF7Q5VXH5 474 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 GLYATQ6IB77 296 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 REEP3Q6NUK4 255 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 NPSR1Q6W5P4 371 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 C16orf62Q7Z3J2 963 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 APLFQ8IW19 511 aaPredicted RBP11.94□□□□□ -0.5
SPG7-209ENST00000564047 AMER2Q8N7J2 671 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 NFKBIDQ8NI38 313 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 SLC26A7Q8TE54 656 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 THAP4Q8WY91 577 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 PIK3R3Q92569 461 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 TMEM19Q96HH6 336 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 FER1L6-AS2Q96M78 137 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 TRNT1Q96Q11 434 aaKnown RBP11.94□□□□□ -0.5
SPG7-209ENST00000564047 GAL3ST4Q96RP7 486 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 DEFB126Q9BYW3 111 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 PCDHAC1Q9H158 963 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 NXF5Q9H1B4 397 aaKnown RBP11.94□□□□□ -0.5
SPG7-209ENST00000564047 RYDENQ9NUL5 291 aaKnown RBP11.94□□□□□ -0.5
SPG7-209ENST00000564047 WDR70Q9NW82 654 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 CALML5Q9NZT1 146 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 C6orf203Q9P0P8 240 aaPredicted RBP11.94□□□□□ -0.5
SPG7-209ENST00000564047 ACTR3BQ9P1U1 418 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 EGFL7Q9UHF1 273 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 ANGPT4Q9Y264 503 aa11.94□□□□□ -0.5
SPG7-209ENST00000564047 BOD1L1Q8NFC6 3051 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 GXYLT2A0PJZ3 443 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 CDC14CA4D256 554 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 ZNF891A8MT65 544 aaPredicted RBP11.93□□□□□ -0.5
SPG7-209ENST00000564047 CXCR6O00574 342 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 ARPC2O15144 300 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 ACOX3O15254 700 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 KLK10O43240 276 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 SLC28A2O43868 658 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 PRKNO60260 465 aaPredicted RBP11.93□□□□□ -0.5
SPG7-209ENST00000564047 SERPINA7P05543 415 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 WT1P19544 449 aaPredicted RBP11.93□□□□□ -0.5
SPG7-209ENST00000564047 SOX11P35716 441 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 PIGAP37287 484 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 CXADRP78310 365 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 MRPS22P82650 360 aaKnown RBP11.93□□□□□ -0.5
SPG7-209ENST00000564047 SRSF6Q13247 344 aaKnown RBP11.93□□□□□ -0.5
SPG7-209ENST00000564047 FLOT2Q14254 428 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 GPAT3Q53EU6 434 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 DCST2Q5T1A1 773 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 IRAK1BP1Q5VVH5 260 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 AP1ARQ63HQ0 302 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 LCN8Q6JVE9 175 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 CCDC80Q76M96 950 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 DHFR2Q86XF0 187 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 KBTBD2Q8IY47 623 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 ANKFN1Q8N957 763 aa11.93□□□□□ -0.5
SPG7-209ENST00000564047 OR52E4Q8NGH9 312 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms