RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 GGTLC2Q14390 218 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 RAB35Q15286 201 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 HIST2H2ACQ16777 129 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 RAET1LQ5VY80 246 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 HIST2H2AA3Q6FI13 130 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 MED27Q6P2C8 311 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 TFAP2EQ6VUC0 442 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 B3GLCTQ6Y288 498 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 DEF8Q6ZN54 512 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 FRA10AC1Q70Z53 315 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 CTAGE4Q8IX94 777 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 TCAIMQ8N3R3 496 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 RNF10Q8N5U6 811 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 NAT8LQ8N9F0 302 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 BANPQ8N9N5 519 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 SNX31Q8N9S9 440 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 PDPRQ8NCN5 879 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 OR4K17Q8NGC6 315 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 HUS1BQ8NHY5 278 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 TMCO6Q96DC7 493 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 DTNBP1Q96EV8 351 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 CERS2Q96G23 380 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 POTEKPQ9BYX7 375 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 DSN1Q9H410 356 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 C12orf49Q9H741 205 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 FOLH1BQ9HBA9 442 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 ARMCX1Q9P291 453 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 XPR1Q9UBH6 696 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 CTNNAL1Q9UBT7 734 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 CES1P1Q9UKY3 287 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 GPR55Q9Y2T6 319 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 TSC22D4Q9Y3Q8 395 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 SNX8Q9Y5X2 465 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 AP4B1Q9Y6B7 739 aa6.84□□□□□ -1.31
HERPUD1-206ENST00000563343 ABCD4O14678 606 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 SMAD9O15198 467 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 NME6O75414 186 aaPredicted RBP6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 BANF1O75531 89 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 REM1O75628 298 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 KRT14P02533 472 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 GBAP04062 536 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 ATP1B1P05026 303 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 TUBBP07437 444 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 CT45A8P0DMV1 189 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 CT45A9P0DMV2 189 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 APEHP13798 732 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 PORP16435 677 aaPredicted RBP6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 SERPINB1P30740 379 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 XKP51811 444 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 RAP1GDS1P52306 607 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 EFNA4P52798 201 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 GANABQ14697 944 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 SGCBQ16585 318 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 GLYR1Q49A26 553 aaPredicted RBP6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 TRMT12Q53H54 448 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 CT45A2Q5DJT8 189 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 CDKL4Q5MAI5 379 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 TTC27Q6P3X3 843 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 TRMT10BQ6PF06 316 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 NPSR1Q6W5P4 371 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 Q6ZSR9 355 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 NUFIP2Q7Z417 695 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 GALNT10Q86SR1 603 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 STK32CQ86UX6 486 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 EXOC3L1Q86VI1 746 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 ADCY4Q8NFM4 1077 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 OR4K14Q8NGD5 310 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 OR52B6Q8NGF0 335 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 OR52R1Q8NGF1 315 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 OR10D3Q8NH80 312 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 UBE2E3Q969T4 207 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 NXNL1Q96CM4 212 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 C1GALT1C1Q96EU7 318 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 BTBD9Q96Q07 612 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 ADOQ96SZ5 270 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 NPAS1Q99742 590 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 DHRS9Q9BPW9 319 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 BHLHE41Q9C0J9 482 aaPredicted RBP6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 DERL2Q9GZP9 239 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 DDX47Q9H0S4 455 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 CNOT10Q9H9A5 744 aaKnown RBP6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 SMYD2Q9NRG4 433 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 GLRX2Q9NS18 164 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 MED11Q9P086 117 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 BCAP29Q9UHQ4 241 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 CFL2Q9Y281 166 aa6.83□□□□□ -1.32
HERPUD1-206ENST00000563343 FAM187AA6NFU0 413 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 POM121CA8CG34 1229 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 SHISA8B8ZZ34 492 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 NDUFS8O00217 210 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 FADS1O60427 444 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 PLGP00747 810 aaPredicted RBP6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 COL6A2P12110 1019 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 EPB42P16452 691 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 ZNF23P17027 643 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 IL32P24001 234 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 EVI2BP34910 448 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 PIK3CBP42338 1070 aa6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 EIF1AXP47813 144 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-206ENST00000563343 PNLIPRP2P54317 469 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 210.9 ms