RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 COX18Q8N8Q8 333 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 OR52R1Q8NGF1 315 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 SLC38A4Q969I6 547 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 MCHR1Q99705 422 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 CAPN10Q9HC96 672 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 DUSP22Q9NRW4 184 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 KLHL28Q9NXS3 571 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 DNAJC27Q9NZQ0 273 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 KLHL3Q9UH77 587 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 IFT52Q9Y366 437 aa17.8■□□□□ 0.44
SMPD3-203ENST00000563226 AGAP5A6NIR3 686 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 M0R082 166 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 SRPX2O60687 465 aaPredicted RBP17.79■□□□□ 0.44
SMPD3-203ENST00000563226 SLC35E2P0CK97 266 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 ENTPD1P49961 510 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 HNRNPKP61978 463 aaKnown RBP eCLIP17.79■□□□□ 0.44
SMPD3-203ENST00000563226 TRAM2Q15035 370 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 PLEKHM3Q6ZWE6 761 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 CACTIN-AS1Q8N1I8 211 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 ZNF619Q8N2I2 560 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 GPR151Q8TDV0 419 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.79■□□□□ 0.44
SMPD3-203ENST00000563226 PLA2G12AQ9BZM1 189 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 CLN6Q9NWW5 311 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 HRKO00198 91 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 OR10H2O60403 315 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 MPZL2O60487 215 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 PTHP01270 115 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 DCNP07585 359 aaKnown RBP17.79■□□□□ 0.44
SMPD3-203ENST00000563226 ATXN8OSP0DMR3 200 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 PTNP21246 168 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 RPS4Y1P22090 263 aaKnown RBP17.79■□□□□ 0.44
SMPD3-203ENST00000563226 GABRA3P34903 492 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 LIPAP38571 399 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 MLLT3P42568 568 aaPredicted RBP17.79■□□□□ 0.44
SMPD3-203ENST00000563226 SNRPGP62308 76 aaKnown RBP17.79■□□□□ 0.44
SMPD3-203ENST00000563226 ALDH6A1Q02252 535 aaKnown RBP17.79■□□□□ 0.44
SMPD3-203ENST00000563226 C14orf28Q4W4Y0 310 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 ZC3H14Q6PJT7 736 aaKnown RBP17.79■□□□□ 0.44
SMPD3-203ENST00000563226 ZAR1Q86SH2 424 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 P2RY8Q86VZ1 359 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 VWA5B2Q8N398 1253 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 LINC00471Q8N535 108 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 RPL3LQ92901 407 aaKnown RBP17.79■□□□□ 0.44
SMPD3-203ENST00000563226 NELL2Q99435 816 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 STACQ99469 402 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 DSN1Q9H410 356 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 EGLN3Q9H6Z9 239 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 TRIM45Q9H8W5 580 aaPredicted RBP17.79■□□□□ 0.44
SMPD3-203ENST00000563226 SOHLH2Q9NX45 425 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 CNIH4Q9P003 139 aa17.79■□□□□ 0.44
SMPD3-203ENST00000563226 TMEM184BQ9Y519 407 aaPredicted RBP17.79■□□□□ 0.44
SMPD3-203ENST00000563226 SH3D21A4FU49 640 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 AP3D1O14617 1153 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 STX11O75558 287 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 PIAS2O75928 621 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 ADORA3P0DMS8 318 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 RNH1P13489 461 aaKnown RBP17.78■□□□□ 0.44
SMPD3-203ENST00000563226 PRG2P13727 222 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 S1PR1P21453 382 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 ZNF136P52737 540 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 MLLT1Q03111 559 aaPredicted RBP17.78■□□□□ 0.44
SMPD3-203ENST00000563226 COX10Q12887 443 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 ZNF155Q12901 538 aaPredicted RBP17.78■□□□□ 0.44
SMPD3-203ENST00000563226 SLC13A2Q13183 592 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 IRF3Q14653 427 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 LARS2Q15031 903 aaKnown RBP17.78■□□□□ 0.44
SMPD3-203ENST00000563226 OGFOD3Q6PK18 319 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 ZNF730Q6ZMV8 503 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 GDF7Q7Z4P5 450 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 TCEANCQ8N8B7 351 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 NDNFQ8TB73 568 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 FAM46AQ96IP4 442 aaKnown RBP17.78■□□□□ 0.44
SMPD3-203ENST00000563226 ZNF285Q96NJ3 590 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 SLC25A19Q9HC21 320 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 IRAK4Q9NWZ3 460 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 TVP23BQ9NYZ1 205 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 SATB2Q9UPW6 733 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 RNF215Q9Y6U7 377 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 HYKKA2RU49 373 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 HRO43593 1189 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 PRKYO43930 277 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 KIAA0513O60268 411 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 FOSL2P15408 326 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 CD36P16671 472 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 TGFBR1P36897 503 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 SLC15A1P46059 708 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 FNTBP49356 437 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 EMP3P54852 163 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 VBP1P61758 197 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 BTG2P78543 158 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 ST3GAL3Q11203 375 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 GINS1Q14691 196 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 KCNAB1Q14722 419 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 NDUFA9Q16795 377 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 ACSM5Q6NUN0 579 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 CASP12Q6UXS9 341 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 CLDN23Q96B33 292 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 ARSGQ96EG1 525 aa17.78■□□□□ 0.44
SMPD3-203ENST00000563226 SLC41A3Q96GZ6 507 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms