RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ALBP02768 609 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 NPIPA8P0DM63 369 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 PRKAR1BP31321 381 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 DCDP81605 110 aaKnown RBP16.75■□□□□ 0.27
COMMD4-208ENST00000563220 FOXD4Q12950 439 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-208ENST00000563220 IL11RAQ14626 422 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 ZNHIT3Q15649 155 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-208ENST00000563220 NPTX1Q15818 432 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 LCN10Q6JVE6 187 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 DHRS4L2Q6PKH6 230 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 TSPYL5Q86VY4 417 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-208ENST00000563220 ZNF619Q8N2I2 560 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 GALNT15Q8N3T1 639 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 PLPP5Q8NEB5 264 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 RDH12Q96NR8 316 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 RLIMQ9NVW2 624 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 SLC9A8Q9Y2E8 581 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 IFT52Q9Y366 437 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 CACNA1HO95180 2353 aa16.75■□□□□ 0.27
COMMD4-208ENST00000563220 POLR1CO15160 346 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-208ENST00000563220 FRS3O43559 492 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 BRINP1O60477 761 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 CBFA2T3O75081 653 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 GADD45GO95257 159 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 DDAH2O95865 285 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 ONECUT2O95948 504 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 IGKV1D-16P01601 117 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 ZGLP1P0C6A0 271 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 CT45A8P0DMV1 189 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 CT45A9P0DMV2 189 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 POLR2IP36954 125 aaKnown RBP16.74■□□□□ 0.27
COMMD4-208ENST00000563220 PEX19P40855 299 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 CT45A2Q5DJT8 189 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 AP1ARQ63HQ0 302 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 FAHD1Q6P587 224 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 USP51Q70EK9 711 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 GALNT5Q7Z7M9 940 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 BPHLQ86WA6 291 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-208ENST00000563220 PEX5LQ8IYB4 626 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 OR7G1Q8NGA0 311 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 GIPC3Q8TF64 312 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 ARHGDIGQ99819 225 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 ITPAQ9BY32 194 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 AKIRIN1Q9H9L7 192 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-208ENST00000563220 NMNAT1Q9HAN9 279 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-208ENST00000563220 PAPOLBQ9NRJ5 636 aaKnown RBP16.74■□□□□ 0.27
COMMD4-208ENST00000563220 ACAD8Q9UKU7 415 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 A4GNTQ9UNA3 340 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 ZNF443Q9Y2A4 671 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-208ENST00000563220 CCDC88CQ9P219 2028 aa16.74■□□□□ 0.27
COMMD4-208ENST00000563220 SMIM31A0A1B0GVY4 71 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 H0YAE9 185 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 PEX12O00623 359 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 KIAA0513O60268 411 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 SOX30O94993 753 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 HBQ1P09105 142 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 RPS4Y1P22090 263 aaKnown RBP16.73■□□□□ 0.27
COMMD4-208ENST00000563220 MYF6P23409 242 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 IGFBP5P24593 272 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 PIGAP37287 484 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 SLC37A1P57057 533 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 MYBPC1Q00872 1141 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 SPEM2Q0P670 501 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 KCNAB2Q13303 367 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 PIN1Q13526 163 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-208ENST00000563220 ELAVL1Q15717 326 aaKnown RBP16.73■□□□□ 0.27
COMMD4-208ENST00000563220 MICAQ29983 383 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 NAXDQ8IW45 347 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 ATG16L2Q8NAA4 619 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 ZSCAN1Q8NBB4 408 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 EDEM2Q9BV94 578 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 PRR14Q9BWN1 585 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 OR8D2Q9GZM6 311 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 SLC24A3Q9HC58 644 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 FAM118AQ9NWS6 357 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 PCDHGA8Q9Y5G5 932 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 CLCA3PQ9Y6N3 262 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 TNFRSF10AO00220 468 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 PRKNO60260 465 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-208ENST00000563220 TPST2O60704 377 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 IGKV3-11P04433 115 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 IL7RP16871 459 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 ZNF28P17035 718 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 TRHRP34981 398 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-208ENST00000563220 RFX3P48380 749 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 MC2RQ01718 297 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 OCA2Q04671 838 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 NNATQ16517 81 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 ZNF836Q6ZNA1 936 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 LANCL3Q6ZV70 420 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 OVCH1Q7RTY7 1134 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 OFCC1Q8IZS5 231 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 SLC5A8Q8N695 610 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 OR10G2Q8NGC3 310 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 SLC2A12Q8TD20 617 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 ZNF721Q8TF20 911 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 PMEPA1Q969W9 287 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 DHRS1Q96LJ7 313 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 FEVQ99581 238 aa16.73■□□□□ 0.27
COMMD4-208ENST00000563220 ZNF696Q9H7X3 374 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms