RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TTTY12Q9BZ98 90 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 UCK2Q9BZX2 261 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 ZNF385DQ9H6B1 395 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 RMND5AQ9H871 391 aa14.38□□□□□ -0.11
USB1-208ENST00000563207 SIRT3Q9NTG7 399 aaPredicted RBP14.38□□□□□ -0.11
USB1-208ENST00000563207 C6orf47O95873 294 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 DRD4P21917 467 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 PIGAP37287 484 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 MAGEA5P43359 124 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 CCT3P49368 545 aaKnown RBP14.37□□□□□ -0.11
USB1-208ENST00000563207 TMED10P49755 219 aaKnown RBP14.37□□□□□ -0.11
USB1-208ENST00000563207 CDK9P50750 372 aaKnown RBP14.37□□□□□ -0.11
USB1-208ENST00000563207 PHC1P78364 1004 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 PLGLB1Q02325 96 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 DUSP8Q13202 625 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 ZNHIT3Q15649 155 aaPredicted RBP14.37□□□□□ -0.11
USB1-208ENST00000563207 VPS26BQ4G0F5 336 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 BLOC1S3Q6QNY0 202 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 LYPD8Q6UX82 237 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 GDF7Q7Z4P5 450 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 SPATA21Q7Z572 469 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 CCDC71Q8IV32 467 aaPredicted RBP14.37□□□□□ -0.11
USB1-208ENST00000563207 NUP43Q8NFH3 380 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 OR56A1Q8NGH5 318 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 OR5M9Q8NGP3 310 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 PHF10Q8WUB8 498 aaKnown RBP14.37□□□□□ -0.11
USB1-208ENST00000563207 NUDT8Q8WV74 236 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 FAM120BQ96EK7 910 aaKnown RBP14.37□□□□□ -0.11
USB1-208ENST00000563207 VSTM2LQ96N03 204 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 MS4A4EQ96PG1 132 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 BTBD9Q96Q07 612 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 GAL3ST4Q96RP7 486 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 PNPLA3Q9NST1 481 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 TUBA8Q9NY65 449 aaPredicted RBP14.37□□□□□ -0.11
USB1-208ENST00000563207 ADAM21Q9UKJ8 722 aa14.37□□□□□ -0.11
USB1-208ENST00000563207 GPR55Q9Y2T6 319 aaPredicted RBP14.37□□□□□ -0.11
USB1-208ENST00000563207 NKX2-6A6NCS4 301 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 FRG2CA6NGY1 282 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 NPIPA2E9PIF3 369 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 NPIPA3F8WFD2 350 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 TO15178 435 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 SLC22A2O15244 555 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 SNX3O60493 162 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 CCDC22O60826 627 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 ERN1O75460 977 aaKnown RBP14.36□□□□□ -0.11
USB1-208ENST00000563207 GLSO94925 669 aaPredicted RBP14.36□□□□□ -0.11
USB1-208ENST00000563207 NADKO95544 446 aaPredicted RBP14.36□□□□□ -0.11
USB1-208ENST00000563207 KRT16P08779 473 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 NAGAP17050 411 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 CNR1P21554 472 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 UQCRC2P22695 453 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 PTGER4P35408 488 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 ZFP36L2P47974 494 aaKnown RBP14.36□□□□□ -0.11
USB1-208ENST00000563207 PRIM2P49643 509 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 DGKQP52824 942 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 FOXO1Q12778 655 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 AGKQ53H12 422 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 FUNDC1Q8IVP5 155 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 TMEM251Q8N6I4 163 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 CDRT4Q8N9R6 151 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 OR4A15Q8NGL6 344 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 OR9I1Q8NGQ6 314 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 HOXB13Q92826 284 aaPredicted RBP14.36□□□□□ -0.11
USB1-208ENST00000563207 SGCZQ96LD1 299 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 ELAC2Q9BQ52 826 aaKnown RBP14.36□□□□□ -0.11
USB1-208ENST00000563207 CXorf36Q9H7Y0 433 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 FOLH1BQ9HBA9 442 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 ZCCHC3Q9NUD5 404 aaKnown RBP14.36□□□□□ -0.11
USB1-208ENST00000563207 GIN1Q9NXP7 522 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 CCDC167Q9P0B6 97 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 SNX8Q9Y5X2 465 aa14.36□□□□□ -0.11
USB1-208ENST00000563207 CCDC154A6NI56 674 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 EFNA1P20827 205 aaPredicted RBP14.35□□□□□ -0.11
USB1-208ENST00000563207 TRPC1P48995 793 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 SPDYE7PQ495Y7 208 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 RTL4Q6ZR62 310 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 CLECL1Q8IZS7 167 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 SIMC1Q8NDZ2 872 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 CA5BP1Q8WTZ4 195 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 SPDL1Q96EA4 605 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 ITCHQ96J02 903 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 PANX1Q96RD7 426 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 LMF2Q9BU23 707 aaKnown RBP14.35□□□□□ -0.11
USB1-208ENST00000563207 ITPAQ9BY32 194 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 NXF5Q9H1B4 397 aaKnown RBP14.35□□□□□ -0.11
USB1-208ENST00000563207 ZDHHC11Q9H8X9 412 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 ANKRA2Q9H9E1 313 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 PROK2Q9HC23 129 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 NPDC1Q9NQX5 325 aaPredicted RBP14.35□□□□□ -0.11
USB1-208ENST00000563207 RNF6Q9Y252 685 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 DTX4Q9Y2E6 619 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 NPFFR2Q9Y5X5 522 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 PHF3Q92576 2039 aaKnown RBP14.35□□□□□ -0.11
USB1-208ENST00000563207 DNAJC13O75165 2243 aa14.35□□□□□ -0.11
USB1-208ENST00000563207 EXPH5Q8NEV8 1989 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 POLQO75417 2590 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 FAM90A27PA6NNH2 459 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 RFXANKO14593 260 aa14.34□□□□□ -0.11
USB1-208ENST00000563207 SHOX2O60902 331 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms