RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ENPP1P22413 925 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 ACVR2AP27037 513 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 ZXDBP98169 803 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 TBRG1Q3YBR2 411 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 KLHL24Q6TFL4 600 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 LAPTM4BQ86VI4 370 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 SLITRK4Q8IW52 837 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 NAGSQ8N159 534 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 ZNF619Q8N2I2 560 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 IL22RA1Q8N6P7 574 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 OR2T11Q8NH01 316 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 PFDN5Q99471 154 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 KNL1Q8NG31 2342 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 PCDHGA12O60330 932 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 HMGN2P05204 90 aaKnown RBP7.11□□□□□ -1.27
TCF4-216ENST00000562680 SBK3P0C264 359 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 GIMD1P0DJR0 217 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 FOLR3P41439 243 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 CAMK1Q14012 370 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 GTDC1Q4AE62 458 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 CCSMST1Q4G0I0 132 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 TMEM31Q5JXX7 168 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 KLHL17Q6TDP4 642 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 FAM83HQ6ZRV2 1179 aaPredicted RBP7.11□□□□□ -1.27
TCF4-216ENST00000562680 METTL27Q8N6F8 245 aaPredicted RBP7.11□□□□□ -1.27
TCF4-216ENST00000562680 GALNT11Q8NCW6 608 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 TMEM246Q9BRR3 403 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 TCEAL7Q9BRU2 100 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 TUBB1Q9H4B7 451 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 C11orf16Q9NQ32 467 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 TM7SF3Q9NS93 570 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 CLEC1BQ9P126 229 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 ICKQ9UPZ9 632 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 K7EQS6 105 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 ZNF823P16415 610 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 CTRB1P17538 263 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 NR4A1P22736 598 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 HTR2BP41595 481 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 MC3RP41968 323 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 CAPZBP47756 277 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 PCP4P48539 62 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 CHAF1BQ13112 559 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 CTRB2Q6GPI1 263 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 CBLL1Q75N03 491 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 VN1R5Q7Z5H4 357 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 FGD2Q7Z6J4 655 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 KRT77Q7Z794 578 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 DPPA2Q7Z7J5 298 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 GID4Q8IVV7 300 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 EID2Q8N6I1 236 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 DNAJA4Q8WW22 397 aaPredicted RBP7.1□□□□□ -1.27
TCF4-216ENST00000562680 CDC6Q99741 560 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 KAT8Q9H7Z6 458 aaKnown RBP7.1□□□□□ -1.27
TCF4-216ENST00000562680 DDX31Q9H8H2 851 aaKnown RBP7.1□□□□□ -1.27
TCF4-216ENST00000562680 GLS2Q9UI32 602 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 ZNF638Q14966 1978 aaKnown RBP7.1□□□□□ -1.27
TCF4-216ENST00000562680 KCNK5O95279 499 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 IL33O95760 270 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 SLC35E2P0CK97 266 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 POU2F1P14859 743 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 TACR1P25103 407 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 CDKN3Q16667 212 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 UGT8Q16880 541 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 LRIF1Q5T3J3 769 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 SLC48A1Q6P1K1 146 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 PAMR1Q6UXH9 720 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 COMMD2Q86X83 199 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 PTRH1Q86Y79 214 aaKnown RBP7.1□□□□□ -1.27
TCF4-216ENST00000562680 ADGRG5Q8IZF4 528 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 OR9A2Q8NGT5 310 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 HMGCLL1Q8TB92 370 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 BAHD1Q8TBE0 780 aaPredicted RBP7.1□□□□□ -1.27
TCF4-216ENST00000562680 RAB2BQ8WUD1 216 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 EGLN2Q96KS0 407 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 TP63Q9H3D4 680 aaPredicted RBP7.1□□□□□ -1.27
TCF4-216ENST00000562680 SERHLQ9NQF3 203 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 LOC100506127A0A0U1RQW1 187 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 C17orf105B2RV13 164 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 SGK494L7N484 410 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 VILLO15195 856 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 CTNSO60931 367 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 SNX4O95219 450 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 CPOXP36551 454 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 BCL6P41182 706 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 GPR107Q5VW38 600 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 POMZP3Q6PJE2 187 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 OR8J1Q8NGP2 316 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 GRHL3Q8TE85 626 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 SNX33Q8WV41 574 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 TM4SF18Q96CE8 201 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 NEURL3Q96EH8 262 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 WDR34Q96EX3 536 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 ZNF354BQ96LW1 612 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 TRNT1Q96Q11 434 aaKnown RBP7.1□□□□□ -1.27
TCF4-216ENST00000562680 ZNF300Q96RE9 604 aaPredicted RBP7.1□□□□□ -1.27
TCF4-216ENST00000562680 SECISBP2Q96T21 854 aaKnown RBP7.1□□□□□ -1.27
TCF4-216ENST00000562680 NUDT16L1Q9BRJ7 211 aaKnown RBP7.1□□□□□ -1.27
TCF4-216ENST00000562680 TSSK6Q9BXA6 273 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 CTPS2Q9NRF8 586 aa7.1□□□□□ -1.27
TCF4-216ENST00000562680 FGF21Q9NSA1 209 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms