RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 FAM174BQ3ZCQ3 159 aa18.21■□□□□ 0.51
TSPAN3-210ENST00000561277 TRILQ7L0X0 811 aa18.21■□□□□ 0.51
TSPAN3-210ENST00000561277 CD163Q86VB7 1156 aa18.21■□□□□ 0.51
TSPAN3-210ENST00000561277 OR1J4Q8NGS1 313 aa18.21■□□□□ 0.51
TSPAN3-210ENST00000561277 PSMA8Q8TAA3 256 aa18.21■□□□□ 0.51
TSPAN3-210ENST00000561277 ACTRT2Q8TDY3 377 aa18.21■□□□□ 0.51
TSPAN3-210ENST00000561277 CKAP2Q8WWK9 683 aa18.21■□□□□ 0.51
TSPAN3-210ENST00000561277 SLC6A15Q9H2J7 730 aa18.21■□□□□ 0.51
TSPAN3-210ENST00000561277 FLRT3Q9NZU0 649 aa18.21■□□□□ 0.51
TSPAN3-210ENST00000561277 MRTO4Q9UKD2 239 aaKnown RBP18.21■□□□□ 0.51
TSPAN3-210ENST00000561277 C15orf41Q9Y2V0 281 aa18.21■□□□□ 0.51
TSPAN3-210ENST00000561277 GPR45Q9Y5Y3 372 aa18.21■□□□□ 0.51
TSPAN3-210ENST00000561277 TRGV5A0A0B4J1U4 118 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 ZG16O60844 167 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 TRAPPC6AO75865 159 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 ELAVL4P26378 380 aaKnown RBP18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 MAP3K8P41279 467 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 MAN2A2P49641 1150 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 PSMD4P55036 377 aaKnown RBP18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 TIGD3Q6B0B8 471 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 DOLPP1Q86YN1 238 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 CLEC4FQ8N1N0 589 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 COX18Q8N8Q8 333 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 OR56A1Q8NGH5 318 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 OR4A15Q8NGL6 344 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 FAM57AQ8TBR7 257 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 HOXB13Q92826 284 aaPredicted RBP18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 QPCTLQ9NXS2 382 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 SUCOQ9UBS9 1254 aaKnown RBP18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 PCDHGB4Q9UN71 923 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 HRH3Q9Y5N1 445 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 WIF1Q9Y5W5 379 aa18.2■□□□□ 0.5
TSPAN3-210ENST00000561277 PTPN13Q12923 2485 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 SNPHO15079 494 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 SCO2O43819 266 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 IL33O95760 270 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 IGKV1D-16P01601 117 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 ESRRAP11474 423 aaPredicted RBP18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 IDO1P14902 403 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 S100A3P33764 101 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 EVI2BP34910 448 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 PHC1P78364 1004 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 DPY19L1Q2PZI1 675 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 OR5M10Q6IEU7 315 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 ZCCHC12Q6PEW1 402 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 FIGNL1Q6PIW4 674 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 EPGNQ6UW88 154 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 VPS37AQ8NEZ2 397 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 SFXN5Q8TD22 340 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 NTNG2Q96CW9 530 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 MAGEB18Q96M61 343 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 UBQLN3Q9H347 655 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 SERHLQ9NQF3 203 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 FAF1Q9UNN5 650 aaPredicted RBP18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 DIDO1Q9BTC0 2240 aaKnown RBP18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 HECTD1Q9ULT8 2610 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 GTF3C1Q12789 2109 aa18.19■□□□□ 0.5
TSPAN3-210ENST00000561277 RNF103-CHMP3A0A140T963 221 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 A1L4Q6 167 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 C17orf51A8MQB3 221 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 UBDO15205 165 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 CPSF4O95639 269 aaKnown RBP18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 ENDOUP21128 410 aaKnown RBP18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 PTPN6P29350 595 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 IL12AP29459 219 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 DGKQP52824 942 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 ANXA8L1Q5VT79 327 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 ACAD11Q709F0 780 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 OR5M9Q8NGP3 310 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 MOAP1Q96BY2 351 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 CCDC120Q96HB5 630 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 PHF12Q96QT6 1004 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 ZBTB18Q99592 522 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 ACKR4Q9NPB9 350 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 UTP20O75691 2785 aaKnown RBP18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 DNAJC13O75165 2243 aa18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 NUP214P35658 2090 aaPredicted RBP18.18■□□□□ 0.5
TSPAN3-210ENST00000561277 PRSS51A0A1B0GVH4 220 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 WIPF3A6NGB9 483 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 AQP7O14520 342 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 SUSD5O60279 629 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 HCN1O60741 890 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 SCN2BO60939 215 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 UTS2O95399 124 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 STX5Q13190 355 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 CCNJQ5T5M9 372 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 CDC73Q6P1J9 531 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 NCCRP1Q6ZVX7 275 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 WDSUB1Q8N9V3 476 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 ADAMTS15Q8TE58 950 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 CDS1Q92903 461 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 PSMG3-AS1Q96PY0 264 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 ACTRT3Q9BYD9 372 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 PNPLA3Q9NST1 481 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 GPATCH2Q9NW75 528 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 SPRR3Q9UBC9 169 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 A0A1B0GVC2 190 aa18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 USP9YO00507 2555 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 POLR3GO15318 223 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-210ENST00000561277 KCNK2O95069 426 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms