RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	EMC2	Q15006	297 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	HKDC1	Q2TB90	917 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	AGK	Q53H12	422 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	HSP90AA5P	Q58FG0	334 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	DDI2	Q5TDH0	399 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	AP1AR	Q63HQ0	302 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	GPR142	Q7Z601	462 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	MYOCD	Q8IZQ8	938 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	MAPK1IP1L	Q8NDC0	245 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	DENND6B	Q8NEG7	585 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	FBXO25	Q8TCJ0	367 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	VPS39	Q96JC1	886 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	SAMD8	Q96LT4	415 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	ATF6B	Q99941	703 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	SH3GL3	Q99963	347 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	RBM4B	Q9BQ04	359 aa	Known RBP	4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	FTHL17	Q9BXU8	183 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	JPT2	Q9H910	190 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	SP140L	Q9H930	580 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	TAS2R3	Q9NYW6	316 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	PAK5	Q9P286	719 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	EXTL2	Q9UBQ6	330 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	IL20RA	Q9UHF4	553 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	ZMYM6	O95789	1325 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	ANKRD50	Q9ULJ7	1429 aa		4.38	□□□□□ -1.71
TCF12-223	ENST00000561235	ABCC6	O95255	1503 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235		A0A1B0GU03	582 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	TEX48	A0A1B0GUV7	120 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235		K7ERI5	159 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	E2F6	O75461	281 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	PALM	O75781	387 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	APBB3	O95704	486 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	SERPINB2	P05120	415 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	LMO2	P25791	158 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	PTPN4	P29074	926 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	RDX	P35241	583 aa	Known RBP	4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	CAMLG	P49069	296 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	NDST1	P52848	882 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	FCHO2	Q0JRZ9	810 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	CCDC173	Q0VFZ6	552 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	RAPSN	Q13702	412 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	SYCP1	Q15431	976 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	LDLRAP1	Q5SW96	308 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	METTL7B	Q6UX53	244 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	STXBP4	Q6ZWJ1	553 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	TIPARP	Q7Z3E1	657 aa	Known RBP	4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	SAMD12	Q8N8I0	201 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	ZBTB44	Q8NCP5	570 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	TMEM37	Q8WXS4	190 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	RAB3C	Q96E17	227 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	ZNF396	Q96N95	335 aa	Predicted RBP	4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	HSD17B14	Q9BPX1	270 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	LRRCC1	Q9C099	1032 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	HEXA-AS1	Q9H8Q6	139 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	LIN28A	Q9H9Z2	209 aa	Known RBP	4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	IL1RL2	Q9HB29	575 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	SOHLH2	Q9NX45	425 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	GTSE1	Q9NYZ3	720 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	CNOT2	Q9NZN8	540 aa	Known RBP	4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	LHX3	Q9UBR4	397 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	MIOX	Q9UGB7	285 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	RARRES3	Q9UL19	164 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	ZNF175	Q9Y473	711 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	KLF2	Q9Y5W3	355 aa	Predicted RBP	4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	KDM6A	O15550	1401 aa	Predicted RBP	4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	COL6A3	P12111	3177 aa		4.37	□□□□□ -1.71
TCF12-223	ENST00000561235	TRIOBP	Q9H2D6	2365 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	PPL	O60437	1756 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	SHISA9	B4DS77	424 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	TRIM16	O95361	564 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	SEMA4F	O95754	770 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	HPR	P00739	348 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	OAS1	P00973	400 aa	Known RBP	4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	IGHG3	P01860	377 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	OPN1MW	P04001	364 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	OPN1MW2	P0DN77	364 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	OPN1MW3	P0DN78	364 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	CAPN2	P17655	700 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	TMOD1	P28289	359 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	MAT2A	P31153	395 aa	Known RBP	4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	VEGFC	P49767	419 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	RAG2	P55895	527 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	SLC26A5	P58743	744 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	GMFB	P60983	142 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	MYBPC1	Q00872	1141 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	ACY1	Q03154	408 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	PDIA5	Q14554	519 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	CCL14	Q16627	93 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	DEFB115	Q30KQ5	88 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	C9orf66	Q5T8R8	295 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	TTC19	Q6DKK2	380 aa	Predicted RBP	4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	RHBDD2	Q6NTF9	364 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	C16orf87	Q6PH81	154 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	REG3G	Q6UW15	175 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	OLFM4	Q6UX06	510 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	SMIM5	Q71RC9	77 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	TMEM110	Q86TL2	294 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	AMZ2	Q86W34	360 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	IPMK	Q8NFU5	416 aa		4.36	□□□□□ -1.71
TCF12-223	ENST00000561235	OR4Q3	Q8NH05	313 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms