RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 GRHL2Q6ISB3 625 aa8.9□□□□□ -0.98
TPM1-225ENST00000560679 CCDC121Q6ZUS5 278 aa8.9□□□□□ -0.98
TPM1-225ENST00000560679 LRRC70Q7Z2Q7 622 aa8.9□□□□□ -0.98
TPM1-225ENST00000560679 NUP54Q7Z3B4 507 aa8.9□□□□□ -0.98
TPM1-225ENST00000560679 MILR1Q7Z6M3 343 aa8.9□□□□□ -0.98
TPM1-225ENST00000560679 GPSM1Q86YR5 675 aa8.9□□□□□ -0.98
TPM1-225ENST00000560679 RNF138Q8WVD3 245 aa8.9□□□□□ -0.98
TPM1-225ENST00000560679 UBE2E3Q969T4 207 aa8.9□□□□□ -0.98
TPM1-225ENST00000560679 MTERF1Q99551 399 aaKnown RBP8.9□□□□□ -0.98
TPM1-225ENST00000560679 NAT9Q9BTE0 207 aa8.9□□□□□ -0.98
TPM1-225ENST00000560679 LYARQ9NX58 379 aaKnown RBP8.9□□□□□ -0.98
TPM1-225ENST00000560679 ZNF180Q9UJW8 692 aa8.9□□□□□ -0.98
TPM1-225ENST00000560679 DKKL1Q9UK85 242 aa8.9□□□□□ -0.98
TPM1-225ENST00000560679 YLPM1P49750 1951 aaKnown RBP8.9□□□□□ -0.99
TPM1-225ENST00000560679 IGHV4-30-2A0A087WSY4 118 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 AQP8O94778 261 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 CBX7O95931 251 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 GBAP04062 536 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 PPP3CBP16298 524 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 TAC1P20366 129 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 SERPINB9P50453 376 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 SUCLG1P53597 346 aaKnown RBP8.89□□□□□ -0.99
TPM1-225ENST00000560679 GAS1P54826 345 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 NAB1Q13506 487 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 EXOSC7Q15024 291 aaKnown RBP8.89□□□□□ -0.99
TPM1-225ENST00000560679 OR5M10Q6IEU7 315 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 ADAM5Q6NVV9 412 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 CYS1Q717R9 158 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.89□□□□□ -0.99
TPM1-225ENST00000560679 WFDC8Q8IUA0 241 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 CTAGE3PQ8IX95 158 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 CNPY4Q8N129 248 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 PPM1NQ8N819 430 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 ANKS4BQ8N8V4 417 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 BANPQ8N9N5 519 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 OR7G1Q8NGA0 311 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 NEUROG1Q92886 237 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 EXT2Q93063 718 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 TRMT61AQ96FX7 289 aaKnown RBP8.89□□□□□ -0.99
TPM1-225ENST00000560679 APOPT1Q96IL0 206 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 LCORQ96JN0 433 aaPredicted RBP8.89□□□□□ -0.99
TPM1-225ENST00000560679 ELAC2Q9BQ52 826 aaKnown RBP8.89□□□□□ -0.99
TPM1-225ENST00000560679 PINK1Q9BXM7 581 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 CD244Q9BZW8 370 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 AMBRA1Q9C0C7 1298 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 DDX31Q9H8H2 851 aaKnown RBP8.89□□□□□ -0.99
TPM1-225ENST00000560679 CAB39LQ9H9S4 337 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 POPDC3Q9HBV1 291 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 FGFR1OP2Q9NVK5 253 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 MAT2BQ9NZL9 334 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 ZNF639Q9UID6 485 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 GDF2Q9UK05 429 aaPredicted RBP8.89□□□□□ -0.99
TPM1-225ENST00000560679 PROCRQ9UNN8 238 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 LIPT1Q9Y234 373 aa8.89□□□□□ -0.99
TPM1-225ENST00000560679 MRPS18CQ9Y3D5 142 aaKnown RBP8.89□□□□□ -0.99
TPM1-225ENST00000560679 TRIM49D1C9J1S8 452 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 ACOX3O15254 700 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 TM9SF1O15321 606 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 PHGDHO43175 533 aaKnown RBP8.88□□□□□ -0.99
TPM1-225ENST00000560679 SNX3O60493 162 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 SNRPAP09012 282 aaKnown RBP8.88□□□□□ -0.99
TPM1-225ENST00000560679 CCDC166P0CW27 439 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 CPMP14384 443 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 CD1DP15813 335 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 KRT4P19013 534 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 NT5EP21589 574 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 GRK2P25098 689 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 DPP4P27487 766 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 PIK3R1P27986 724 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 PIK3CBP42338 1070 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 SLC6A8P48029 635 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 ARFIP1P53367 373 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 CLDN20P56880 219 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 DUSP2Q05923 314 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 SLC18A2Q05940 514 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 FRG1Q14331 258 aaKnown RBP8.88□□□□□ -0.99
TPM1-225ENST00000560679 FGFBP1Q14512 234 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 PON3Q15166 354 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 ZKSCAN8Q15776 578 aaPredicted RBP8.88□□□□□ -0.99
TPM1-225ENST00000560679 PRICKLE4Q2TBC4 344 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 TMEM249Q2WGJ8 235 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 PGGHGQ32M88 737 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 LGSNQ5TDP6 509 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 FAM111BQ6SJ93 734 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 FAM214BQ7L5A3 538 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 SPATA21Q7Z572 469 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 ATG4DQ86TL0 474 aaPredicted RBP8.88□□□□□ -0.99
TPM1-225ENST00000560679 UBTD2Q8WUN7 234 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 ROBO4Q8WZ75 1007 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 FBXW5Q969U6 566 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 TMBIM1Q969X1 311 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 REPS1Q96D71 796 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 MTBPQ96DY7 904 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 PAIP2Q9BPZ3 127 aaKnown RBP8.88□□□□□ -0.99
TPM1-225ENST00000560679 ACTR6Q9GZN1 396 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 RHOJQ9H4E5 214 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 PRM3Q9NNZ6 103 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 SMYD2Q9NRG4 433 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 TMEM160Q9NX00 188 aa8.88□□□□□ -0.99
TPM1-225ENST00000560679 MKS1Q9NXB0 559 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms