RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 PCGF2P35227 344 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 KHKP50053 298 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 POU6F2P78424 691 aaPredicted RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 MRPS22P82650 360 aaKnown RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 CDK6Q00534 326 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 PLAURQ03405 335 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 CHRNEQ04844 493 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 ZNF155Q12901 538 aaPredicted RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 AIMP2Q13155 320 aaKnown RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 SCARB2Q14108 478 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 NNATQ16517 81 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 MAPK14Q16539 360 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.64□□□□□ -1.03
HERC1-206ENST00000559996 ZNF791Q3KP31 576 aaPredicted RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 CRB2Q5IJ48 1285 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 RPS26P11Q5JNZ5 115 aaPredicted RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 DCST2Q5T1A1 773 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 GCNT6Q5T4J0 391 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 C6orf163Q5TEZ5 329 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 ZNF468Q5VIY5 522 aaPredicted RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 GLYATQ6IB77 296 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 INO80CQ6PI98 192 aaPredicted RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 FIGNL1Q6PIW4 674 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 BRICD5Q6PL45 260 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 ANGPTL8Q6UXH0 198 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 UNQ6494/PRO21346Q6UXR6 183 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 APOOLQ6UXV4 268 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 LRRC74BQ6ZQY2 392 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 SLC29A4Q7RTT9 530 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 GALNT10Q86SR1 603 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 COMTD1Q86VU5 262 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 PROSER1Q86XN7 944 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 TMEM102Q8N9M5 508 aaPredicted RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 BRIX1Q8TDN6 353 aaKnown RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 GPR151Q8TDV0 419 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 SNRNP27Q8WVK2 155 aaKnown RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 WDR60Q8WVS4 1066 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 HGDQ93099 445 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 THOC3Q96J01 351 aaKnown RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 RASL10BQ96S79 203 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 WFDC6Q9BQY6 131 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 SPATA9Q9BWV2 254 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 DEFB126Q9BYW3 111 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 RTN4RQ9BZR6 473 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 ZNF552Q9H707 407 aaPredicted RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 GORASP2Q9H8Y8 452 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 SH2D2AQ9NP31 389 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 ATP13A2Q9NQ11 1180 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 THUMPD1Q9NXG2 353 aaKnown RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 FLRT3Q9NZU0 649 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 POMPQ9Y244 141 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 NPFFR2Q9Y5X5 522 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 GPC6Q9Y625 555 aaPredicted RBP8.64□□□□□ -1.03
HERC1-206ENST00000559996 KCNMB2Q9Y691 235 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 CFAP47Q6ZTR5 3102 aa8.64□□□□□ -1.03
HERC1-206ENST00000559996 TCRBV5S2A0A599 114 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 PRAMEF25A6NGN4 478 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 ARGFXA6NJG6 315 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 B4DXG7 233 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 M0QX08 132 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 CXCR6O00574 342 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 PEX12O00623 359 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 ACOX3O15254 700 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 ITGA10O75578 1167 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 UGT2B17O75795 530 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 OR2J2O76002 312 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 MFN2O95140 757 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 AVPP01185 164 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 ALPPP05187 535 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 BCHEP06276 602 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 ATP6V1B2P21281 511 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 KDELR2P33947 212 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 PTGDSP41222 190 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 DMTNQ08495 405 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 TRAP1Q12931 704 aaKnown RBP8.63□□□□□ -1.03
HERC1-206ENST00000559996 ZNF630Q2M218 657 aaPredicted RBP8.63□□□□□ -1.03
HERC1-206ENST00000559996 PRAMEF8Q5VWM4 474 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 PRAMEF7Q5VXH5 474 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 REEP3Q6NUK4 255 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 JMJD6Q6NYC1 403 aaPredicted RBP8.63□□□□□ -1.03
HERC1-206ENST00000559996 ERICH5Q6P6B1 374 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 TSEN54Q7Z6J9 526 aaKnown RBP8.63□□□□□ -1.03
HERC1-206ENST00000559996 RPS19BP1Q86WX3 136 aaKnown RBP8.63□□□□□ -1.03
HERC1-206ENST00000559996 APLFQ8IW19 511 aaPredicted RBP8.63□□□□□ -1.03
HERC1-206ENST00000559996 KBTBD2Q8IY47 623 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 PRR22Q8IZ63 422 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 SLC34A3Q8N130 599 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 GALNT16Q8N428 558 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 SLC15A4Q8N697 577 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 METTL25Q8N6Q8 603 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 SIRT6Q8N6T7 355 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 KDF1Q8NAX2 398 aaPredicted RBP8.63□□□□□ -1.03
HERC1-206ENST00000559996 C11orf65Q8NCR3 313 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 FAM13CQ8NE31 585 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 HIPK4Q8NE63 616 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 OR52E4Q8NGH9 312 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 OR5L2Q8NGL0 311 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 OR4C3Q8NH37 302 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 JADE3Q92613 823 aa8.63□□□□□ -1.03
HERC1-206ENST00000559996 DIO2Q92813 273 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms