RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 GAAP10253 952 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 ACP2P11117 423 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 POLR2CP19387 275 aaPredicted RBP7.56□□□□□ -1.2
SMAD3-212ENST00000559937 CDH3P22223 829 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 TGM1P22735 817 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 OMPP47874 163 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 CDC20Q12834 499 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 KRR1Q13601 381 aaKnown RBP7.56□□□□□ -1.2
SMAD3-212ENST00000559937 ATP1A4Q13733 1029 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 COL19A1Q14993 1142 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 LTB4RQ15722 352 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 ZSWIM7Q19AV6 140 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF628Q5EBL2 1059 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 KIAA0895LQ68EN5 471 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 ACSM5Q6NUN0 579 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF730Q6ZMV8 503 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 PLEKHG7Q6ZR37 379 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 PLEKHM3Q6ZWE6 761 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 MBOAT2Q6ZWT7 520 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 RD3Q7Z3Z2 195 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 RANBP3LQ86VV4 465 aaPredicted RBP7.56□□□□□ -1.2
SMAD3-212ENST00000559937 VRK2Q86Y07 508 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 KIF18BQ86Y91 864 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 RNF113BQ8IZP6 322 aaKnown RBP7.56□□□□□ -1.2
SMAD3-212ENST00000559937 CDRT4Q8N9R6 151 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 AVL9Q8NBF6 648 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 OR52I1Q8NGK6 324 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 CCL4L1Q8NHW4 92 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 ZCCHC10Q8TBK6 192 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 JPH3Q8WXH2 748 aaPredicted RBP7.56□□□□□ -1.2
SMAD3-212ENST00000559937 PIK3R3Q92569 461 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 HOXB13Q92826 284 aaPredicted RBP7.56□□□□□ -1.2
SMAD3-212ENST00000559937 KAT2AQ92830 837 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 RFKQ969G6 155 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF582Q96NG8 517 aaPredicted RBP7.56□□□□□ -1.2
SMAD3-212ENST00000559937 SDF2Q99470 211 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 MCHR1Q99705 422 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 CHCHD6Q9BRQ6 235 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 COL25A1Q9BXS0 654 aaPredicted RBP7.56□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF350Q9GZX5 532 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 ARMC7Q9H6L4 198 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 EQTNQ9NQ60 294 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 GPR27Q9NS67 375 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 SEMA4GQ9NTN9 838 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 NDUFB11Q9NX14 153 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 IL20Q9NYY1 176 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 TVP23BQ9NYZ1 205 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 TESQ9UGI8 421 aaKnown RBP7.56□□□□□ -1.2
SMAD3-212ENST00000559937 KLHL3Q9UH77 587 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 STUB1Q9UNE7 303 aa7.56□□□□□ -1.2
SMAD3-212ENST00000559937 TP53BP1Q12888 1972 aaPredicted RBP7.55□□□□□ -1.2
SMAD3-212ENST00000559937 LOC100506127A0A0U1RQW1 187 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 A0A1W2PS29 197 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 TCRBV21S2A2A0A5A6 115 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 HYKKA2RU49 373 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 BLACEA4D250 179 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 TRAPPC13A5PLN9 417 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 CPSF4LA6NMK7 179 aaKnown RBP7.55□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF670-ZNF695F2Z2N8 137 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 H0Y8X5 98 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 H0YGG7 62 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 SCAMP1O15126 338 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 TLX2O43763 284 aaPredicted RBP7.55□□□□□ -1.2
SMAD3-212ENST00000559937 PRKYO43930 277 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 GALR3O60755 368 aaPredicted RBP7.55□□□□□ -1.2
SMAD3-212ENST00000559937 STX11O75558 287 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 GPR75O95800 540 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 HMGN1P05114 100 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 IGFBP1P08833 259 aaPredicted RBP7.55□□□□□ -1.2
SMAD3-212ENST00000559937 ADRA2AP08913 450 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 HSMCR30P0CW71 290 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 CPEP16870 476 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 MYL12AP19105 171 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 PSMA1P25786 263 aaKnown RBP7.55□□□□□ -1.2
SMAD3-212ENST00000559937 TGFBR1P36897 503 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 MAP3K8P41279 467 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 CD97P48960 835 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF136P52737 540 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 PDX1P52945 283 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 GAS1P54826 345 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 WNT4P56705 351 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 RAB38P57729 211 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 ARF3P61204 181 aaPredicted RBP7.55□□□□□ -1.2
SMAD3-212ENST00000559937 SKP1P63208 163 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 EEF1A1P68104 462 aaKnown RBP7.55□□□□□ -1.2
SMAD3-212ENST00000559937 IFITM3Q01628 133 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 BNC1Q01954 994 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 DLX2Q07687 328 aaPredicted RBP7.55□□□□□ -1.2
SMAD3-212ENST00000559937 SNAPC1Q16533 368 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 PUS10Q3MIT2 529 aaKnown RBP7.55□□□□□ -1.2
SMAD3-212ENST00000559937 DEFB134Q4QY38 66 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 C6orf132Q5T0Z8 1188 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 ARMC4Q5T2S8 1044 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 AGAP7PQ5VUJ5 663 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 TYW3Q6IPR3 259 aaKnown RBP7.55□□□□□ -1.2
SMAD3-212ENST00000559937 RPL13AP3Q6NVV1 102 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 FAM111BQ6SJ93 734 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 TMEM92Q6UXU6 159 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF836Q6ZNA1 936 aa7.55□□□□□ -1.2
SMAD3-212ENST00000559937 Q6ZSR6 202 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms