RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 RRP15Q9Y3B9 282 aaKnown RBP9.64□□□□□ -0.87
TPM1-221ENST00000559831 WDR45Q9Y484 360 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 V9GYQ6 96 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 CPAMD8Q8IZJ3 1885 aa9.64□□□□□ -0.87
TPM1-221ENST00000559831 WDFY3Q8IZQ1 3526 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 EML6Q6ZMW3 1958 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 A0A0G2JPF8 293 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 TMEM200CA6NKL6 621 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 HNRNPCL2B2RXH8 293 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 HNRNPCL3B7ZW38 293 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 M0QX08 132 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 ACOX3O15254 700 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 EFSO43281 561 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 FCMRO60667 390 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 STX11O75558 287 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 OR2J2O76002 312 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 PDE9AO76083 593 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 PGM3O95394 542 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 ZIC2O95409 532 aaPredicted RBP9.63□□□□□ -0.87
TPM1-221ENST00000559831 ZNF682O95780 498 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 ALPPP05187 535 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 HNRNPCL4P0DMR1 293 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 ABCD3P28288 659 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 KDELR2P33947 212 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 PIGAP37287 484 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 ST13P50502 369 aaKnown RBP9.63□□□□□ -0.87
TPM1-221ENST00000559831 RNF144AP50876 292 aaPredicted RBP9.63□□□□□ -0.87
TPM1-221ENST00000559831 PSMD4P55036 377 aaKnown RBP9.63□□□□□ -0.87
TPM1-221ENST00000559831 RRADP55042 308 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 AP2B1P63010 937 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 CHAF1BQ13112 559 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 AIMP2Q13155 320 aaKnown RBP9.63□□□□□ -0.87
TPM1-221ENST00000559831 CCNIQ14094 377 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 FXNQ16595 210 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 FLYWCH1Q4VC44 716 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 IRAK1BP1Q5VVH5 260 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 TYW3Q6IPR3 259 aaKnown RBP9.63□□□□□ -0.87
TPM1-221ENST00000559831 FRRS1Q6ZNA5 592 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 ZAR1Q86SH2 424 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 PATL1Q86TB9 770 aaKnown RBP9.63□□□□□ -0.87
TPM1-221ENST00000559831 KRT73Q86Y46 540 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 ZNF619Q8N2I2 560 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 SLC5A8Q8N695 610 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 ZNF614Q8N883 585 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 CLEC1AQ8NC01 280 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 C17orf47Q8NEP4 570 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 SLC22A8Q8TCC7 542 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 THAP4Q8WY91 577 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 GATA6Q92908 595 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 TP53INP1Q96A56 240 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 TAMM41Q96BW9 452 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 OMA1Q96E52 524 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 RSRC1Q96IZ7 334 aaKnown RBP9.63□□□□□ -0.87
TPM1-221ENST00000559831 COL21A1Q96P44 957 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 ZNF607Q96SK3 696 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 G6PC3Q9BUM1 346 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 ZNF350Q9GZX5 532 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 QRSL1Q9H0R6 528 aaKnown RBP9.63□□□□□ -0.87
TPM1-221ENST00000559831 SLC38A1Q9H2H9 487 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 DENND2DQ9H6A0 471 aaPredicted RBP9.63□□□□□ -0.87
TPM1-221ENST00000559831 ATP13A2Q9NQ11 1180 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 MYOTQ9UBF9 498 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 POLHQ9Y253 713 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 ZNF451Q9Y4E5 1061 aa9.63□□□□□ -0.87
TPM1-221ENST00000559831 A6NL46 340 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 TO15178 435 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 RRP8O43159 456 aaKnown RBP9.62□□□□□ -0.87
TPM1-221ENST00000559831 HS6ST1O60243 411 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 KIAA0513O60268 411 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 MAN1A2O60476 641 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 ITGA10O75578 1167 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 GCM2O75603 506 aaPredicted RBP9.62□□□□□ -0.87
TPM1-221ENST00000559831 NADKO95544 446 aaPredicted RBP9.62□□□□□ -0.87
TPM1-221ENST00000559831 IL33O95760 270 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 IFNA14P01570 189 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 PCBP3P57721 371 aaKnown RBP9.62□□□□□ -0.87
TPM1-221ENST00000559831 RAPSNQ13702 412 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 DEFB109BQ30KR1 87 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 CYBRD1Q53TN4 286 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 MTX3Q5HYI7 312 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 PRAMEF8Q5VWM4 474 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 PRAMEF7Q5VXH5 474 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 B3GNTL1Q67FW5 361 aaPredicted RBP9.62□□□□□ -0.87
TPM1-221ENST00000559831 CCDC80Q76M96 950 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 RPS19BP1Q86WX3 136 aaKnown RBP9.62□□□□□ -0.87
TPM1-221ENST00000559831 ARMC8Q8IUR7 673 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 SPACA3Q8IXA5 215 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 PEX5LQ8IYB4 626 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 SMYD1Q8NB12 490 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 OR5M3Q8NGP4 307 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 OR10Q1Q8NGQ4 319 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 FAM110BQ8TC76 370 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 SPPL2AQ8TCT8 520 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 DIO2Q92813 273 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 TPD52L3Q96J77 140 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 ADOQ96SZ5 270 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 TRIM45Q9H8W5 580 aaPredicted RBP9.62□□□□□ -0.87
TPM1-221ENST00000559831 GORASP2Q9H8Y8 452 aa9.62□□□□□ -0.87
TPM1-221ENST00000559831 MTHFD2LQ9H903 347 aaPredicted RBP9.62□□□□□ -0.87
TPM1-221ENST00000559831 ZBTB20Q9HC78 741 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms