RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 KRT16P08779 473 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 RFPL3SP0C7P2 107 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 PTGDSP41222 190 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 MAGEA5P43359 124 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 POLR2JP52435 117 aaKnown RBP11.31□□□□□ -0.6
SMAD3-205ENST00000558428 HSF1Q00613 529 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 LRRC74AQ0VAA2 488 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 SNTA1Q13424 505 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 HYAL4Q2M3T9 481 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 C6orf120Q7Z4R8 191 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 GALNT10Q86SR1 603 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 CLEC4FQ8N1N0 589 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 ADAMTS15Q8TE58 950 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 STON2Q8WXE9 905 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 CDS1Q92903 461 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 TMEM41AQ96HV5 264 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 SLC35G5Q96KT7 338 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 CCDC115Q96NT0 180 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 PANX1Q96RD7 426 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 STACQ99469 402 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 SIKE1Q9BRV8 207 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 ZNF703Q9H7S9 590 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-205ENST00000558428 ZDHHC11Q9H8X9 412 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 GALNT9Q9HCQ5 603 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 DUSP22Q9NRW4 184 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 FGFR1OP2Q9NVK5 253 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 GPATCH2Q9NW75 528 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 B4GALT7Q9UBV7 327 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 PCNX1Q96RV3 2341 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 PCNX3Q9H6A9 2034 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 FAM234BA2RU67 622 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 C2orf72A6NCS6 295 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 DYNC1I1O14576 645 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 SNPHO15079 494 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 SCO2O43819 266 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 KCNK2O95069 426 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 IGKV1D-16P01601 117 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 CELA3AP09093 270 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 TROVE2P10155 538 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMAD3-205ENST00000558428 MATN1P21941 496 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 UQCRC2P22695 453 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 GDF1P27539 372 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 EVI2BP34910 448 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 CHI3L1P36222 383 aaPredicted RBP11.3□□□□□ -0.6
SMAD3-205ENST00000558428 MDH1P40925 334 aaKnown RBP11.3□□□□□ -0.6
SMAD3-205ENST00000558428 ZFP36L2P47974 494 aaKnown RBP11.3□□□□□ -0.6
SMAD3-205ENST00000558428 MRPL19P49406 292 aaKnown RBP11.3□□□□□ -0.6
SMAD3-205ENST00000558428 RPS26P62854 115 aaKnown RBP11.3□□□□□ -0.6
SMAD3-205ENST00000558428 POU6F2P78424 691 aaPredicted RBP11.3□□□□□ -0.6
SMAD3-205ENST00000558428 SLC10A1Q14973 349 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 TIGD2Q4W5G0 525 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 EXOSC6Q5RKV6 272 aaKnown RBP11.3□□□□□ -0.6
SMAD3-205ENST00000558428 FNDC7Q5VTL7 733 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 FIGNL1Q6PIW4 674 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 ANGPTL8Q6UXH0 198 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 PIAS4Q8N2W9 510 aaPredicted RBP11.3□□□□□ -0.6
SMAD3-205ENST00000558428 OR1J4Q8NGS1 313 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 OR7D2Q96RA2 312 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 SLC35A5Q9BS91 424 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 INPP5KQ9BT40 448 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 BTBD2Q9BX70 525 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 PIGUQ9H490 435 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 CCDC134Q9H6E4 229 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 LDAHQ9H6V9 325 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 FLRT3Q9NZU0 649 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 WIF1Q9Y5W5 379 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 LIPGQ9Y5X9 500 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 DOPEY2Q9Y3R5 2298 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 MED12Q93074 2177 aa11.3□□□□□ -0.6
SMAD3-205ENST00000558428 COL12A1Q99715 3063 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 A0A1B0GTH9 108 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 CCDC154A6NI56 674 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 RFXANKO14593 260 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 ZNHIT1O43257 154 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 FADS1O60427 444 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 SLC19A2O60779 497 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 TRAPPC6AO75865 159 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 SOX30O94993 753 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 UTS2O95399 124 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 STSP08842 583 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 ABOP16442 354 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 NCF2P19878 526 aaPredicted RBP11.29□□□□□ -0.6
SMAD3-205ENST00000558428 ELAVL4P26378 380 aaKnown RBP11.29□□□□□ -0.6
SMAD3-205ENST00000558428 CDKN2CP42773 168 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 MAN2A2P49641 1150 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 CLK3P49761 638 aaKnown RBP11.29□□□□□ -0.6
SMAD3-205ENST00000558428 ATP4BP51164 291 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 CASP9P55211 416 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 SF3A3Q12874 501 aaKnown RBP eCLIP11.29□□□□□ -0.61e-10■■■■■ 34.8
SMAD3-205ENST00000558428 SQLEQ14534 574 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 TOMM20Q15388 145 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMAD3-205ENST00000558428 CCNJQ5T5M9 372 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 C1QL3Q5VWW1 255 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 TIGD3Q6B0B8 471 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 ARHGAP11AQ6P4F7 1023 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 ZNF621Q6ZSS3 439 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 MSANTD1Q6ZTZ1 278 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 SPPL2CQ8IUH8 684 aa11.29□□□□□ -0.6
SMAD3-205ENST00000558428 TRIML2Q8N7C3 387 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms