RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 CBLL1Q75N03 491 aa15.6■□□□□ 0.09
SNX1-203ENST00000558040 EIF3MQ7L2H7 374 aaKnown RBP15.6■□□□□ 0.09
SNX1-203ENST00000558040 ARMC8Q8IUR7 673 aa15.6■□□□□ 0.09
SNX1-203ENST00000558040 TAGAPQ8N103 731 aa15.6■□□□□ 0.09
SNX1-203ENST00000558040 ZNF619Q8N2I2 560 aa15.6■□□□□ 0.09
SNX1-203ENST00000558040 BCORP1Q8N888 145 aa15.6■□□□□ 0.09
SNX1-203ENST00000558040 ZNF441Q8N8Z8 693 aa15.6■□□□□ 0.09
SNX1-203ENST00000558040 FAM110BQ8TC76 370 aa15.6■□□□□ 0.09
SNX1-203ENST00000558040 SPPL2AQ8TCT8 520 aa15.6■□□□□ 0.09
SNX1-203ENST00000558040 ADAMTS17Q8TE56 1095 aa15.6■□□□□ 0.09
SNX1-203ENST00000558040 COL21A1Q96P44 957 aa15.6■□□□□ 0.09
SNX1-203ENST00000558040 MTHFD2LQ9H903 347 aaPredicted RBP15.6■□□□□ 0.09
SNX1-203ENST00000558040 RYDENQ9NUL5 291 aaKnown RBP15.6■□□□□ 0.09
SNX1-203ENST00000558040 SEC14L3Q9UDX4 400 aa15.6■□□□□ 0.09
SNX1-203ENST00000558040 ANAPC2Q9UJX6 822 aa15.6■□□□□ 0.09
SNX1-203ENST00000558040 GPC6Q9Y625 555 aaPredicted RBP15.6■□□□□ 0.09
SNX1-203ENST00000558040 DSPPQ9NZW4 1301 aa15.6■□□□□ 0.09
SNX1-203ENST00000558040 KIAA0513O60268 411 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 GCM2O75603 506 aaPredicted RBP15.59■□□□□ 0.09
SNX1-203ENST00000558040 SPINK2P20155 84 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 LCN1P31025 176 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 RFX3P48380 749 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 CHRNEQ04844 493 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 PLCXD2Q0VAA5 305 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 CLN3Q13286 438 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 ATP1A4Q13733 1029 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.59■□□□□ 0.09
SNX1-203ENST00000558040 FLYWCH1Q4VC44 716 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 FAM98BQ52LJ0 330 aaKnown RBP15.59■□□□□ 0.09
SNX1-203ENST00000558040 TYW3Q6IPR3 259 aaKnown RBP15.59■□□□□ 0.09
SNX1-203ENST00000558040 GALNT10Q86SR1 603 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 VASH2Q86V25 355 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 PEX5LQ8IYB4 626 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 SLC34A3Q8N130 599 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 OR4N2Q8NGD1 307 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 FGF11Q92914 225 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 TAMM41Q96BW9 452 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 DUS3LQ96G46 650 aaKnown RBP15.59■□□□□ 0.09
SNX1-203ENST00000558040 FER1L6-AS2Q96M78 137 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 SAP130Q9H0E3 1048 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 MAGIXQ9H6Y5 334 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 BAG5Q9UL15 447 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 MKLN1Q9UL63 735 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 IFT52Q9Y366 437 aa15.59■□□□□ 0.09
SNX1-203ENST00000558040 PRKNO60260 465 aaPredicted RBP15.58■□□□□ 0.08
SNX1-203ENST00000558040 MGRN1O60291 552 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 FCMRO60667 390 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 PRKD3O94806 890 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 MFN2O95140 757 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 IL33O95760 270 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 OPN1SWP03999 348 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 IL12BP29460 328 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 SLC7A1P30825 629 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 SELENOWP63302 87 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 CHRNB3Q05901 458 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 RIPK1Q13546 671 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 GPR68Q15743 365 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 AP1ARQ63HQ0 302 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 FKBP9P1Q75LS8 142 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 KBTBD2Q8IY47 623 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 ADGRG5Q8IZF4 528 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 ZSCAN1Q8NBB4 408 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 ZNF248Q8NDW4 579 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 SLC22A8Q8TCC7 542 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 CANT1Q8WVQ1 401 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 KCNE4Q8WWG9 221 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 OIT3Q8WWZ8 545 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 SLC47A1Q96FL8 570 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 PYURFQ96I23 114 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 TPD52L3Q96J77 140 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 DOHHQ9BU89 302 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 HOXD1Q9GZZ0 328 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 YY1AP1Q9H869 796 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 MYOTQ9UBF9 498 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 ZNF232Q9UNY5 417 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 AURKCQ9UQB9 309 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 PCDHGA10Q9Y5H3 936 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 V9GYQ6 96 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 DMXL1Q9Y485 3027 aa15.58■□□□□ 0.08
SNX1-203ENST00000558040 CDC14CA4D256 554 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 HS6ST1O60243 411 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 REM1O75628 298 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 ZIC2O95409 532 aaPredicted RBP15.57■□□□□ 0.08
SNX1-203ENST00000558040 SERPINA7P05543 415 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 DBIP07108 87 aaKnown RBP15.57■□□□□ 0.08
SNX1-203ENST00000558040 PABPC4LP0CB38 370 aaKnown RBP15.57■□□□□ 0.08
SNX1-203ENST00000558040 TMED10P49755 219 aaKnown RBP15.57■□□□□ 0.08
SNX1-203ENST00000558040 CRYBA2P53672 197 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 LARS2Q15031 903 aaKnown RBP15.57■□□□□ 0.08
SNX1-203ENST00000558040 IRAK1BP1Q5VVH5 260 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 ENPP6Q6UWR7 440 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 OLIG3Q7RTU3 272 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 SLC5A8Q8N695 610 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 SLC15A4Q8N697 577 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 OR52P1PQ8NH57 321 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 THAP3Q8WTV1 239 aaPredicted RBP15.57■□□□□ 0.08
SNX1-203ENST00000558040 PYDC1Q8WXC3 89 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 THAP4Q8WY91 577 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 PROX1Q92786 737 aa15.57■□□□□ 0.08
SNX1-203ENST00000558040 DIO2Q92813 273 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms