RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 PACSIN3Q9UKS6 424 aa12.34□□□□□ -0.43
SNRPA1-204ENST00000558020 ABCG2Q9UNQ0 655 aa12.34□□□□□ -0.43
SNRPA1-204ENST00000558020 C19orf53Q9UNZ5 99 aaPredicted RBP12.34□□□□□ -0.43
SNRPA1-204ENST00000558020 EIF3LQ9Y262 564 aaKnown RBP12.34□□□□□ -0.43
SNRPA1-204ENST00000558020 DOCK7Q96N67 2140 aa12.34□□□□□ -0.43
SNRPA1-204ENST00000558020 PRRC2AP48634 2157 aaKnown RBP12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 SH3D21A4FU49 640 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 TTC36A6NLP5 189 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 A8MXE2 369 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 MSTNO14793 375 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 GLRA3O75311 464 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 JUNP05412 331 aaKnown RBP12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 EVI2BP34910 448 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 GANABQ14697 944 aaKnown RBP12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 CCDC153Q494R4 210 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 IKBIPQ70UQ0 350 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 TRIM46Q7Z4K8 759 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 GCNT2Q8N0V5 402 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 SMPDL3BQ92485 455 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 SLC39A3Q9BRY0 314 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 GSTO2Q9H4Y5 243 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 NEUROD4Q9HD90 331 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 MYNNQ9NPC7 610 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 DDX18Q9NVP1 670 aaKnown RBP12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 GALNT8Q9NY28 637 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 CLCF1Q9UBD9 225 aa12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 RPH3AQ9Y2J0 694 aaPredicted RBP12.33□□□□□ -0.44
SNRPA1-204ENST00000558020 SLC22A20A6NK97 555 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 SEC22BO75396 215 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 HK1P19367 917 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 PCYT1AP49585 367 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 HTR6P50406 440 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 GAS1P54826 345 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 CLDN18P56856 261 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 PSG6Q00889 435 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 FGFBP1Q14512 234 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 DEFB113Q30KQ7 82 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 KRTAP21-3Q3LHN1 58 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 GLYR1Q49A26 553 aaPredicted RBP12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 VPS26BQ4G0F5 336 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 FAM71E1Q6IPT2 247 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 NOXRED1Q6NXP6 359 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 NPSR1Q6W5P4 371 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 ZYG11AQ6WRX3 759 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 OR4N2Q8NGD1 307 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 RNF138Q8WVD3 245 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 ELP4Q96EB1 424 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 KCNA7Q96RP8 456 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 PIGQQ9BRB3 760 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 DSN1Q9H410 356 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 PPCSQ9HAB8 311 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 FAM120CQ9NX05 1096 aaKnown RBP12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 ZFHX3Q15911 3703 aa12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 HRNRQ86YZ3 2850 aaPredicted RBP12.32□□□□□ -0.44
SNRPA1-204ENST00000558020 A0A1W2PNV4 684 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 UPK1AO00322 258 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 SCO2O43819 266 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 FADS1O60427 444 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 NME6O75414 186 aaPredicted RBP12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 TNFRSF21O75509 655 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 SMNDC1O75940 238 aaKnown RBP eCLIP12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 RSL1D1O76021 490 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 KCNH1O95259 989 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 IFI6P09912 130 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 UROSP10746 265 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 MC3RP41968 323 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 DNAJB13P59910 316 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 RPS3AP61247 264 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 C17orf67Q0P5P2 114 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 RAET1LQ5VY80 246 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 TMEM107Q6UX40 140 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 UBQLNLQ8IYU4 475 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 OR2L13Q8N349 312 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 CNEP1R1Q8N9A8 125 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 FADS6Q8N9I5 356 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 CCDC63Q8NA47 563 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 DUSP19Q8WTR2 217 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 AMDHD1Q96NU7 426 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 G6PC3Q9BUM1 346 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 TBL1XR1Q9BZK7 514 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 PLEKHF2Q9H8W4 249 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 ELOVL5Q9NYP7 299 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 ZNF226Q9NYT6 803 aa12.31□□□□□ -0.44
SNRPA1-204ENST00000558020 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 G3V2L1 256 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 SLC28A1O00337 649 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 UBFD1O14562 309 aaKnown RBP12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 RGS14O43566 566 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 HCRTR2O43614 444 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 DIAPH2O60879 1101 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 TNFSF13O75888 250 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 ATE1O95260 518 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 IL33O95760 270 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 TGM6O95932 706 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 HRGP04196 525 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 CPA3P15088 417 aa12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 DDX5P17844 614 aaKnown RBP12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 TCEA1P23193 301 aaKnown RBP12.3□□□□□ -0.44
SNRPA1-204ENST00000558020 GABRA3P34903 492 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms