RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 SLC7A2P52569 658 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 EFNB2P52799 333 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 INHBCP55103 352 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 CDH6P55285 790 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 CLDN8P56748 225 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 PHEXP78562 749 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 RBBP4Q09028 425 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 BST2Q10589 180 aaKnown RBP3.31□□□□□ -1.88
TDP1-217ENST00000557782 RIGQ13278 110 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 GCKRQ14397 625 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 CHRNA6Q15825 494 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 FAM74A3Q4VXF1 159 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 ZNF626Q68DY1 528 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 KIAA1161Q6NSJ0 714 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 RHBDD2Q6NTF9 364 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 ATRAIDQ6UW56 229 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 LANCL3Q6ZV70 420 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 CREB3L2Q70SY1 520 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 SSX9Q7RTT3 188 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 H2BFWTQ7Z2G1 175 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 SLC22A15Q8IZD6 547 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 ALLCQ8N6M5 410 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 MFSD9Q8NBP5 474 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 OR6F1Q8NGZ6 308 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 RPLP0P6Q8NHW5 317 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 MAIP1Q8WWC4 291 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 ZNRF4Q8WWF5 429 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 ST8SIA1Q92185 356 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 DLX4Q92988 240 aaPredicted RBP3.31□□□□□ -1.88
TDP1-217ENST00000557782 ART4Q93070 314 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 LHX4Q969G2 390 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 C18orf25Q96B23 403 aaPredicted RBP3.31□□□□□ -1.88
TDP1-217ENST00000557782 ST6GAL2Q96JF0 529 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 CCT8L2Q96SF2 557 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 IL25Q9H293 177 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 BLZF1Q9H2G9 400 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 GAREM1Q9H706 876 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 TDRD3Q9H7E2 651 aaKnown RBP3.31□□□□□ -1.88
TDP1-217ENST00000557782 MBD2Q9UBB5 411 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 CYTH4Q9UIA0 394 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 ANAPC7Q9UJX3 599 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 IKZF2Q9UKS7 526 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 FAF1Q9UNN5 650 aaPredicted RBP3.31□□□□□ -1.88
TDP1-217ENST00000557782 PPP2R2CQ9Y2T4 447 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 ZHX2Q9Y6X8 837 aa3.31□□□□□ -1.88
TDP1-217ENST00000557782 NEDD4P46934 1319 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 A0A0A6YYD4 124 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 IQCMA0A1B0GVH7 501 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 SRRM3A6NNA2 597 aaPredicted RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 ZNF879B4DU55 563 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 SURF4O15260 269 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 RBMXL2O75526 392 aaKnown RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 B3GAT3O94766 335 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 CAVIN2O95810 425 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 NPPAP01160 153 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 IGF1P05019 195 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 RPLP0P05388 317 aaKnown RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 IVLP07476 585 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 FHP07954 510 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 H2BFMP0C1H6 154 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 ADORA3P0DMS8 318 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 GCFC2P16383 781 aaKnown RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 AOC1P19801 751 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 MSR1P21757 451 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 UCP1P25874 307 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 CHMLP26374 656 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 GPR183P32249 361 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 RDXP35241 583 aaKnown RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 ATP5C1P36542 298 aaKnown RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 RPL13AP40429 203 aaKnown RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 GYG1P46976 350 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 STARP49675 285 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 CRYBB1P53674 252 aaPredicted RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 ATP1B3P54709 279 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 OGDHQ02218 1023 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 BDH1Q02338 343 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 FHL2Q14192 279 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 EIF2B1Q14232 305 aaKnown RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 SLC17A1Q14916 467 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 P2RY6Q15077 328 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 SYCP1Q15431 976 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 NKAIN1Q4KMZ8 207 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 CYBRD1Q53TN4 286 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 MTX3Q5HYI7 312 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 BEND3Q5T5X7 828 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 WLSQ5T9L3 541 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 AGBL2Q5U5Z8 902 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 PLCXD3Q63HM9 321 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 PNCKQ6P2M8 343 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 CRIP3Q6Q6R5 217 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 BTNL3Q6UXE8 466 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 TUBA1AQ71U36 451 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 TSEN54Q7Z6J9 526 aaKnown RBP3.3□□□□□ -1.88
TDP1-217ENST00000557782 OR4N5Q8IXE1 308 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 OR10A7Q8NGE5 316 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 OR5T2Q8NGG2 359 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 OR4C3Q8NH37 302 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 SECTM1Q8WVN6 248 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 HPSE2Q8WWQ2 592 aa3.3□□□□□ -1.88
TDP1-217ENST00000557782 SGK3Q96BR1 496 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms