RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 DSCR4P56555 118 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-235ENST00000557740 CLDN18P56856 261 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 PPP2R2AP63151 447 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 PSG6Q00889 435 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 STX5Q13190 355 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 GAB1Q13480 694 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 RAET1LQ5VY80 246 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 PLXDC2Q6UX71 529 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 PAMR1Q6UXH9 720 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 TRIM46Q7Z4K8 759 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 P4HA3Q7Z4N8 544 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 OR2L13Q8N349 312 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 RNF138Q8WVD3 245 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 UBLCP1Q8WVY7 318 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-235ENST00000557740 G6PC3Q9BUM1 346 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 CXXC4Q9H2H0 198 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 PPCSQ9HAB8 311 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 SDHAF3Q9NRP4 125 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 GALNT8Q9NY28 637 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 TAS2R7Q9NYW3 318 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 PACSIN3Q9UKS6 424 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 C17orf51A8MQB3 221 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 COPEO14579 308 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 PDPK1O15530 556 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 ZIC3O60481 467 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 SEC22BO75396 215 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 UROSP10746 265 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 CPA3P15088 417 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 HK1P19367 917 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 RFX3P48380 749 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 CLK3P49761 638 aaKnown RBP13.25□□□□□ -0.29
SHMT2-235ENST00000557740 GAS1P54826 345 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 PSMD4P55036 377 aaKnown RBP13.25□□□□□ -0.29
SHMT2-235ENST00000557740 DNAJB13P59910 316 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 EEF1A1P68104 462 aaKnown RBP13.25□□□□□ -0.29
SHMT2-235ENST00000557740 GANABQ14697 944 aaKnown RBP13.25□□□□□ -0.29
SHMT2-235ENST00000557740 PRSS53Q2L4Q9 553 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 EEF1A1P5Q5VTE0 462 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 NOXRED1Q6NXP6 359 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 UBQLNLQ8IYU4 475 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 MEIOBQ8N635 442 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.25□□□□□ -0.29
SHMT2-235ENST00000557740 AMDHD1Q96NU7 426 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 ALPK1Q96QP1 1244 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 DSN1Q9H410 356 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 GLIPR2Q9H4G4 154 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 PTGES2Q9H7Z7 377 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 FAM120CQ9NX05 1096 aaKnown RBP13.25□□□□□ -0.29
SHMT2-235ENST00000557740 MID2Q9UJV3 735 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 KIAA1549Q9HCM3 1950 aa13.25□□□□□ -0.29
SHMT2-235ENST00000557740 DOCK7Q96N67 2140 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 A0A1W2PNV4 684 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 SLC22A20A6NK97 555 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 UPK1AO00322 258 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 HCRTR2O43614 444 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 FADS1O60427 444 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 PSMG1O95456 288 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 RAF1P04049 648 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 SHBGP04278 402 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 PEPDP12955 493 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 CRHR1P34998 444 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 CPOXP36551 454 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 HSPB3Q12988 150 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 BCL2A1Q16548 175 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 CLEC6AQ6EIG7 209 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 OR2A2Q6IF42 318 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 CAMKMTQ7Z624 323 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 TGIF2LYQ8IUE0 185 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 FADS6Q8N9I5 356 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 OR2M3Q8NG83 312 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 TBL1XR1Q9BZK7 514 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 C3orf14Q9HBI5 128 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 LRTM1Q9HBL6 345 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 TNFRSF12AQ9NP84 129 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 EQTNQ9NQ60 294 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 OXSMQ9NWU1 459 aa13.24□□□□□ -0.29
SHMT2-235ENST00000557740 PRRC2AP48634 2157 aaKnown RBP13.24□□□□□ -0.29
SHMT2-235ENST00000557740 SH3D21A4FU49 640 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 TTC36A6NLP5 189 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 B4DXG7 233 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 SLC28A1O00337 649 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 SEC14L5O43304 696 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 RGS14O43566 566 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 SMNDC1O75940 238 aaKnown RBP eCLIP13.23□□□□□ -0.29
SHMT2-235ENST00000557740 KCNH1O95259 989 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 IL33O95760 270 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 TGM6O95932 706 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 CRHP06850 196 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 NEFHP12036 1026 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 GPC1P35052 558 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 EEFSECP57772 596 aaKnown RBP13.23□□□□□ -0.29
SHMT2-235ENST00000557740 B3GALT5-AS1P59052 145 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 KEAP1Q14145 624 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 VPS26BQ4G0F5 336 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 LIPMQ5VYY2 423 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 SH2D5Q6ZV89 423 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 SZRD1Q7Z422 152 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 MARCH3Q86UD3 253 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 TDRPQ86YL5 185 aa13.23□□□□□ -0.29
SHMT2-235ENST00000557740 CNEP1R1Q8N9A8 125 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms