RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 RIPPLY2Q5TAB7 128 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 FAM111BQ6SJ93 734 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 LYPD8Q6UX82 237 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 SLC29A4Q7RTT9 530 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 WDR53Q7Z5U6 358 aaPredicted RBP15.23■□□□□ 0.03
NEK9-211ENST00000557673 ZZZ3Q8IYH5 903 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 GOT1L1Q8NHS2 421 aaPredicted RBP15.23■□□□□ 0.03
NEK9-211ENST00000557673 SLC22A8Q8TCC7 542 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 NUDT8Q8WV74 236 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 TESCQ96BS2 214 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 ERP27Q96DN0 273 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 ZBED6CLQ96FA7 236 aaPredicted RBP15.23■□□□□ 0.03
NEK9-211ENST00000557673 DPY30Q9C005 99 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 WWTR1Q9GZV5 400 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 ATAD3AQ9NVI7 634 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 ALKBH4Q9NXW9 302 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 SH3BP4Q9P0V3 963 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 DCTN4Q9UJW0 460 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 PCDHGB3Q9Y5G1 929 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 LIPGQ9Y5X9 500 aa15.23■□□□□ 0.03
NEK9-211ENST00000557673 NUP214P35658 2090 aaPredicted RBP15.22■□□□□ 0.03
NEK9-211ENST00000557673 TRGV5A0A0B4J1U4 118 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 OR6C76A6NM76 312 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 HSPB2A8KAH6 182 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 SYT5O00445 386 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 UBDO15205 165 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 CBX7O95931 251 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 IFI6P09912 130 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 LAMP1P11279 417 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 FOSL1P15407 271 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 DNASE1L1P49184 302 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 FOXO1Q12778 655 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 DUSP8Q13202 625 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 EXOSC7Q15024 291 aaKnown RBP15.22■□□□□ 0.03
NEK9-211ENST00000557673 HSPB2Q16082 182 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 GSTA3Q16772 222 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 DPY19L1Q2PZI1 675 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 ZNF791Q3KP31 576 aaPredicted RBP15.22■□□□□ 0.03
NEK9-211ENST00000557673 PDCD4Q53EL6 469 aaKnown RBP15.22■□□□□ 0.03
NEK9-211ENST00000557673 CPTPQ5TA50 214 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 RTL6Q6ICC9 239 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 ZNF615Q8N8J6 731 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 OR7G1Q8NGA0 311 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 ZFP28Q8NHY6 868 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 COQ8BQ96D53 544 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 TEX37Q96LM6 180 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 ALPK1Q96QP1 1244 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 BHLHE41Q9C0J9 482 aaPredicted RBP15.22■□□□□ 0.03
NEK9-211ENST00000557673 SDR39U1Q9NRG7 319 aaPredicted RBP15.22■□□□□ 0.03
NEK9-211ENST00000557673 RASSF1Q9NS23 344 aa15.22■□□□□ 0.03
NEK9-211ENST00000557673 ACSS1Q9NUB1 689 aaPredicted RBP15.22■□□□□ 0.03
NEK9-211ENST00000557673 RYDENQ9NUL5 291 aaKnown RBP15.22■□□□□ 0.03
NEK9-211ENST00000557673 AKAP6Q13023 2319 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 A0A0G2JND7 137 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 HOXB4P17483 251 aaPredicted RBP15.21■□□□□ 0.03
NEK9-211ENST00000557673 ADH7P40394 386 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 MC3RP41968 323 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 MRPL19P49406 292 aaKnown RBP15.21■□□□□ 0.03
NEK9-211ENST00000557673 GYS2P54840 703 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 NME5P56597 212 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 UFM1P61960 85 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 HSPB3Q12988 150 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 SLC22A10Q63ZE4 541 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 TMEM107Q6UX40 140 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 TMEM64Q6YI46 380 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 ZNF551Q7Z340 670 aaPredicted RBP15.21■□□□□ 0.03
NEK9-211ENST00000557673 LIX1LQ8IVB5 337 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 FBXW8Q8N3Y1 598 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 SIMC1Q8NDZ2 872 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 FAM13CQ8NE31 585 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 OR7G2Q8NG99 324 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 KAT2AQ92830 837 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 SPACA9Q96E40 222 aaPredicted RBP15.21■□□□□ 0.03
NEK9-211ENST00000557673 PRPF18Q99633 342 aaKnown RBP15.21■□□□□ 0.03
NEK9-211ENST00000557673 GPATCH1Q9BRR8 931 aaKnown RBP15.21■□□□□ 0.03
NEK9-211ENST00000557673 OR10A5Q9H207 317 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 TUBA8Q9NY65 449 aaPredicted RBP15.21■□□□□ 0.03
NEK9-211ENST00000557673 FAM53CQ9NYF3 392 aa15.21■□□□□ 0.03
NEK9-211ENST00000557673 BOKQ9UMX3 212 aaPredicted RBP15.21■□□□□ 0.03
NEK9-211ENST00000557673 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.21■□□□□ 0.03
NEK9-211ENST00000557673 A0A087WV62 115 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 C9JVG2 144 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 PLOD2O00469 737 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 PLOD3O60568 738 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 PSMG1O95456 288 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 FBXO45P0C2W1 286 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 EFNA1P20827 205 aaPredicted RBP15.2■□□□□ 0.02
NEK9-211ENST00000557673 IL12AP29459 219 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 UQCRC1P31930 480 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 PIGAP37287 484 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 CDK9P50750 372 aaKnown RBP15.2■□□□□ 0.02
NEK9-211ENST00000557673 DGKQP52824 942 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 MLC1Q15049 377 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 TRMT12Q53H54 448 aaKnown RBP15.2■□□□□ 0.02
NEK9-211ENST00000557673 SPANXN4Q5MJ08 99 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 PRAMEF20Q5VT98 475 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 DND1Q8IYX4 353 aaKnown RBP15.2■□□□□ 0.02
NEK9-211ENST00000557673 SLC15A4Q8N697 577 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 NATD1Q8N6N6 113 aa15.2■□□□□ 0.02
NEK9-211ENST00000557673 ZNF441Q8N8Z8 693 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms