RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ATXN3P54252 364 aaPredicted RBP3.82□□□□□ -1.8
PRPF39-212ENST00000557477 CCNA1P78396 465 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 COX10Q12887 443 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 SPP2Q13103 211 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 LY6DQ14210 128 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 SLC17A1Q14916 467 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 RCN1Q15293 331 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 P2RY14Q15391 338 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 HERC4Q5GLZ8 1057 aaPredicted RBP3.82□□□□□ -1.8
PRPF39-212ENST00000557477 CEP85LQ5SZL2 805 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 FKBP1CQ5VVH2 108 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 LIPJQ5W064 366 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 APOBEC3HQ6NTF7 200 aaKnown RBP3.82□□□□□ -1.8
PRPF39-212ENST00000557477 ZNF613Q6PF04 617 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 TRIM65Q6PJ69 517 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 ADGRD2Q7Z7M1 963 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 SLC22A16Q86VW1 577 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 TBC1D10CQ8IV04 446 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 ELMOD2Q8IZ81 293 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 HDDC3Q8N4P3 179 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 MRPL43Q8N983 215 aaKnown RBP3.82□□□□□ -1.8
PRPF39-212ENST00000557477 ZNF397Q8NF99 534 aaPredicted RBP3.82□□□□□ -1.8
PRPF39-212ENST00000557477 FAM81AQ8TBF8 368 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 SSC4DQ8WTU2 575 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 MOCOSQ96EN8 888 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 DTNBP1Q96EV8 351 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 C16orf58Q96GQ5 468 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 LINC00479Q96M42 142 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 ALKBH3Q96Q83 286 aaPredicted RBP3.82□□□□□ -1.8
PRPF39-212ENST00000557477 TNFRSF13CQ96RJ3 184 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 SPAG8Q99932 426 aaPredicted RBP3.82□□□□□ -1.8
PRPF39-212ENST00000557477 TCHPQ9BT92 498 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 CAPS2Q9BXY5 557 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 WDR41Q9HAD4 459 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 NMUR1Q9HB89 426 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 SLC25A19Q9HC21 320 aa3.82□□□□□ -1.8
PRPF39-212ENST00000557477 MGAMO43451 1857 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 DOCK1Q14185 1865 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 IGHV4-30-2A0A087WSY4 118 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 TRBV5-4A0A0C4DH59 114 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 LOC390937A0A1W2PQ73 354 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 TRAFD1O14545 582 aaPredicted RBP3.81□□□□□ -1.8
PRPF39-212ENST00000557477 PRPSAP2O60256 369 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 NME2P1O60361 137 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 ZNF189O75820 626 aaPredicted RBP3.81□□□□□ -1.8
PRPF39-212ENST00000557477 SYNGR4O95473 234 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 MT-ATP6P00846 226 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 TGFAP01135 160 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 ZCCHC18P0CG32 403 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 MAPK3P27361 379 aaPredicted RBP3.81□□□□□ -1.8
PRPF39-212ENST00000557477 PSMD7P51665 324 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 GSTO1P78417 241 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 FKBP3Q00688 224 aaKnown RBP3.81□□□□□ -1.8
PRPF39-212ENST00000557477 GAMTQ14353 236 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 ZNF146Q15072 292 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 TRADDQ15628 312 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 ECSCRQ19T08 205 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 CCDC40Q4G0X9 1142 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 C2CD6Q53TS8 623 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 NEK5Q6P3R8 708 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 ZCCHC12Q6PEW1 402 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 ISLR2Q6UXK2 745 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 TAF8Q7Z7C8 310 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 KDM8Q8N371 416 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 ARL6IP6Q8N6S5 226 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 LEMD2Q8NC56 503 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 PRSS33Q8NF86 280 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 SPPL2AQ8TCT8 520 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 GTF3AQ92664 365 aaKnown RBP3.81□□□□□ -1.8
PRPF39-212ENST00000557477 P3H4Q92791 437 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 N4BP2L2Q92802 583 aaPredicted RBP3.81□□□□□ -1.8
PRPF39-212ENST00000557477 BADQ92934 168 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 PNPLA2Q96AD5 504 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 NSMCE2Q96MF7 247 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 COQ7Q99807 217 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 TSGA10Q9BZW7 698 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 C1orf21Q9H246 121 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 HSD3B7Q9H2F3 369 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 VCX3BQ9H321 246 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 ZSCAN16Q9H4T2 348 aaPredicted RBP3.81□□□□□ -1.8
PRPF39-212ENST00000557477 XPO7Q9UIA9 1087 aaKnown RBP3.81□□□□□ -1.8
PRPF39-212ENST00000557477 LCMT1Q9UIC8 334 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 ERRFI1Q9UJM3 462 aaPredicted RBP3.81□□□□□ -1.8
PRPF39-212ENST00000557477 CCPG1Q9ULG6 757 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 RNF215Q9Y6U7 377 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 MYH13Q9UKX3 1938 aa3.81□□□□□ -1.8
PRPF39-212ENST00000557477 RANBP2P49792 3224 aaKnown RBP3.81□□□□□ -1.8
PRPF39-212ENST00000557477 CUL9Q8IWT3 2517 aa3.8□□□□□ -1.8
PRPF39-212ENST00000557477 MROH7-TTC4A0A0A0MT08 1334 aa3.8□□□□□ -1.8
PRPF39-212ENST00000557477 LINC00854A0A1B0GVQ3 168 aa3.8□□□□□ -1.8
PRPF39-212ENST00000557477 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
PRPF39-212ENST00000557477 ARHGEF33A8MVX0 844 aa3.8□□□□□ -1.8
PRPF39-212ENST00000557477 EPM2AB3EWF7 344 aa3.8□□□□□ -1.8
PRPF39-212ENST00000557477 NEDD8-MDP1E9PL57 170 aa3.8□□□□□ -1.8
PRPF39-212ENST00000557477 K7EQG2 157 aa3.8□□□□□ -1.8
PRPF39-212ENST00000557477 KIF2AO00139 706 aaPredicted RBP3.8□□□□□ -1.8
PRPF39-212ENST00000557477 FBP2O00757 339 aa3.8□□□□□ -1.8
PRPF39-212ENST00000557477 CHEK1O14757 476 aa3.8□□□□□ -1.8
PRPF39-212ENST00000557477 ADAM12O43184 909 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms