RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 STOMP27105 288 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 TRIM23P36406 574 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 ATP6V1E1P36543 226 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 SSR2P43308 183 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 PITPNBP48739 271 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 CCL23P55773 120 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 CTBP2P56545 445 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 CD276Q5ZPR3 534 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 PYHIN1Q6K0P9 492 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 LYPD8Q6UX82 237 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 OAFQ86UD1 273 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 AMZ2Q86W34 360 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 TMIEQ8NEW7 156 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 OR2T33Q8NG76 320 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 OR4F15Q8NGB8 312 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 SCMH1Q96GD3 660 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 OR2M2Q96R28 347 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 THAP7Q9BT49 309 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-231ENST00000557433 CUEDC1Q9NWM3 386 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-231ENST00000557433 TMA7Q9Y2S6 64 aaKnown RBP15.25■□□□□ 0.03
SHMT2-231ENST00000557433 NUBP2Q9Y5Y2 271 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 NINQ8N4C6 2090 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 DNAH12Q6ZR08 3092 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 SHISA3A0PJX4 238 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 J3QRE1 110 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 SPINT1O43278 529 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 CHP2O43745 196 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 OR5F1O95221 314 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 EVI2BP34910 448 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 CD79BP40259 229 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 RAG2P55895 527 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 VASNQ6EMK4 673 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 ANKRD54Q6NXT1 300 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 SMARCD3Q6STE5 483 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 ZNF620Q6ZNG0 422 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 IDO2Q6ZQW0 420 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 MBOAT2Q6ZWT7 520 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 SHFQ7M4L6 423 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 HDDC2Q7Z4H3 204 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 ACBD7Q8N6N7 88 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 OR4Q3Q8NH05 313 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 FAM46AQ96IP4 442 aaKnown RBP15.25■□□□□ 0.03
SHMT2-231ENST00000557433 GFM1Q96RP9 751 aaKnown RBP15.25■□□□□ 0.03
SHMT2-231ENST00000557433 C7orf50Q9BRJ6 194 aaKnown RBP15.25■□□□□ 0.03
SHMT2-231ENST00000557433 OSGEPL1Q9H4B0 414 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 ZNF275Q9NSD4 429 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-231ENST00000557433 BABAM2Q9NXR7 383 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 ELF5Q9UKW6 265 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-231ENST00000557433 PLAGL1Q9UM63 463 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 AUP1Q9Y679 476 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 CACNG2Q9Y698 323 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 STON1Q9Y6Q2 735 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 KIAA1549LQ6ZVL6 1849 aa15.25■□□□□ 0.03
SHMT2-231ENST00000557433 CD8B2A6NJW9 211 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 NRG2O14511 850 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-231ENST00000557433 LRRTM2O43300 516 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 EMC8O43402 210 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 OR1F1O43749 312 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 LZTS3O60299 673 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-231ENST00000557433 PLOD3O60568 738 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 NCR1O76036 304 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 INHAP05111 366 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 HMGN2P05204 90 aaKnown RBP15.24■□□□□ 0.03
SHMT2-231ENST00000557433 CD8BP10966 210 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 C6P13671 934 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 GNSP15586 552 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 NDUFV2P19404 249 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 AHCYP23526 432 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 EPHA5P54756 1037 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 TAS2R43P59537 309 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 LSM11P83369 360 aaKnown RBP eCLIP15.24■□□□□ 0.03
SHMT2-231ENST00000557433 TGM3Q08188 693 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 SLC9A5Q14940 896 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 COL28A1Q2UY09 1125 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 IDNKQ5T6J7 187 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 DEFB128Q7Z7B8 93 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 LUZP2Q86TE4 346 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 AMIGO1Q86WK6 493 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 SORCS1Q8WY21 1168 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 AHCYL2Q96HN2 611 aaKnown RBP15.24■□□□□ 0.03
SHMT2-231ENST00000557433 DPAGT1Q9H3H5 408 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 TRIM36Q9NQ86 728 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 SEMA4GQ9NTN9 838 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 ENTPD4Q9Y227 616 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 SCN5AQ14524 2016 aa15.24■□□□□ 0.03
SHMT2-231ENST00000557433 LEUTXA8MZ59 168 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 B8ZZF3 427 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 H7BY64 318 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 K7ESM1 405 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 SLC9A3R1O14745 358 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-231ENST00000557433 HRO43593 1189 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 ANXA3P12429 323 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 PAICSP22234 425 aaKnown RBP15.23■□□□□ 0.03
SHMT2-231ENST00000557433 AGFG1P52594 562 aaKnown RBP15.23■□□□□ 0.03
SHMT2-231ENST00000557433 PER3P56645 1201 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 LASP1Q14847 261 aaKnown RBP15.23■□□□□ 0.03
SHMT2-231ENST00000557433 ZNF77Q15935 545 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 ZNF791Q3KP31 576 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-231ENST00000557433 POM121L1PQ3SYA9 428 aa15.23■□□□□ 0.03
SHMT2-231ENST00000557433 TMEM52BQ4KMG9 183 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms