RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TET1Q8NFU7 2136 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 TSC2P49815 1807 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 LTBP2Q14767 1821 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 PCNTO95613 3336 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 MTCL1Q9Y4B5 1905 aaKnown RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 SHROOM3Q8TF72 1996 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 A0A087WV48 116 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 GTPBP10A4D1E9 387 aaKnown RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 ZNF724A8MTY0 619 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 P2RX6O15547 441 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 SCO2O43819 266 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 STBD1O95210 358 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 PGLSO95336 258 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 CCNE2O96020 404 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 GBAP04062 536 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 SKILP12757 684 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 ELK1P19419 428 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 YWHABP31946 246 aaKnown RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 SOAT1P35610 550 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 NAGLUP54802 743 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 SCN1BQ07699 218 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 ABRAXAS2Q15018 415 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 CELF3Q5SZQ8 465 aaKnown RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 SHEQ5VZ18 495 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 LIPJQ5W064 366 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 FAM91A1Q658Y4 838 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 ZNF770Q6IQ21 691 aaPredicted RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 SHQ1Q6PI26 577 aaKnown RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 FAM43BQ6ZT52 329 aaPredicted RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 MOB2Q70IA6 237 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 OTUD6AQ7L8S5 288 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 MIER3Q7Z3K6 550 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 ZSCAN30Q86W11 494 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 GPBP1Q86WP2 473 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 CCDC71Q8IV32 467 aaPredicted RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 MYOCDQ8IZQ8 938 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 CCDC112Q8NEF3 446 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 PPTC7Q8NI37 304 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 DEPDC1BQ8WUY9 529 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 NELFBQ8WX92 580 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 KIFAP3Q92845 792 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 FAM162AQ96A26 154 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 SLC35C1Q96A29 364 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 NTNG2Q96CW9 530 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 TRIM44Q96DX7 344 aaPredicted RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 CCDC51Q96ER9 411 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 ZBED6CLQ96FA7 236 aaPredicted RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 ERGIC2Q96RQ1 377 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 SDHCQ99643 169 aaPredicted RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 CITED2Q99967 270 aaPredicted RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 MAPKAP1Q9BPZ7 522 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 JPH2Q9BR39 696 aaPredicted RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 INPP5KQ9BT40 448 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 NFKBIZQ9BYH8 718 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 DHX33Q9H6R0 707 aaKnown RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 ZWILCHQ9H900 591 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 PARVGQ9HBI0 331 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 UBE2TQ9NPD8 197 aaPredicted RBP2.82□□□□□ -1.96
VRK1-207ENST00000557352 FBXL5Q9UKA1 691 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 PLEKHA6Q9Y2H5 1048 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 SH3GLB1Q9Y371 365 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 Q9Y3F1 56 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 PCDHGA1Q9Y5H4 931 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 ATP8B3O60423 1300 aa2.82□□□□□ -1.96
VRK1-207ENST00000557352 TRAV34A0A0B4J273 112 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 IGKV6-21A0A0C4DH24 114 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 GSTTP1A0A1W2PQM5 241 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 WI2-2373I1.2A0A1W2PRP0 233 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 ARHGEF35A5YM69 484 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 E9PMD0 336 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 CALUO43852 315 aaPredicted RBP2.81□□□□□ -1.96
VRK1-207ENST00000557352 FCGR3BO75015 233 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 ATP9AO75110 1047 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 GH1P01241 217 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 KRT3P12035 628 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 GPX3P22352 226 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 ANXA13P27216 316 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 PSMB4P28070 264 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 HNRNPH3P31942 346 aaKnown RBP2.81□□□□□ -1.96
VRK1-207ENST00000557352 MDH2P40926 338 aaKnown RBP2.81□□□□□ -1.96
VRK1-207ENST00000557352 NAMPTP43490 491 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 GTF2BQ00403 316 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 CNTN2Q02246 1040 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 KRT31Q15323 416 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 GSG1Q2KHT4 349 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 FILIP1LQ4L180 1135 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 C9orf129Q5T035 196 aaKnown RBP2.81□□□□□ -1.96
VRK1-207ENST00000557352 SPECC1LQ69YQ0 1117 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 MSANTD1Q6ZTZ1 278 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 FAM47EQ6ZV65 393 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 ARMCX2Q7L311 632 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 ZNF720Q7Z2F6 126 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 SPATA19Q7Z5L4 167 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 GPR142Q7Z601 462 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 VSTM4Q8IW00 320 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 LRRC8AQ8IWT6 810 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 DAW1Q8N136 415 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 CSGALNACT2Q8N6G5 542 aa2.81□□□□□ -1.96
VRK1-207ENST00000557352 CLEC1AQ8NC01 280 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms