RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 NSL1Q96IY1 281 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 MAGED4Q96JG8 741 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 LITAFQ99732 161 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 RHNO1Q9BSD3 238 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 TRIM51Q9BSJ1 452 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 MRPL1Q9BYD6 325 aaKnown RBP3.38□□□□□ -1.87
CHD8-212ENST00000557329 NLNQ9BYT8 704 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 ZYG11BQ9C0D3 744 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 TNMDQ9H2S6 317 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 CUEDC2Q9H467 287 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 THAP9Q9H5L6 903 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 FANCEQ9HB96 536 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 EXOC1Q9NV70 894 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 STMN3Q9NZ72 180 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 TBC1D29Q9UFV1 150 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 RPH3AQ9Y2J0 694 aaPredicted RBP3.38□□□□□ -1.87
CHD8-212ENST00000557329 PADI2Q9Y2J8 665 aa3.38□□□□□ -1.87
CHD8-212ENST00000557329 ZNF469Q96JG9 3925 aaPredicted RBP3.38□□□□□ -1.87
CHD8-212ENST00000557329 IGHV5-51A0A0C4DH38 117 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 C5orf60A6NFR6 353 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 POLR2DO15514 142 aaKnown RBP3.37□□□□□ -1.87
CHD8-212ENST00000557329 SSX4O60224 188 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 STX10O60499 249 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 SLC19A2O60779 497 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 PTP4A3O75365 173 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 SLCO2B1O94956 709 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 LCA5LO95447 670 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 IGHEP01854 428 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 ABOP16442 354 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 ALOX12P18054 663 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 SAT1P21673 171 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 PNLIPRP2P54317 469 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 MFAP4P55083 255 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 OTUD4Q01804 1114 aaKnown RBP3.37□□□□□ -1.87
CHD8-212ENST00000557329 EPS8Q12929 822 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 PLA2G7Q13093 441 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 STK38Q15208 465 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 CDO1Q16878 200 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 FAM180BQ6P0A1 224 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 FAM173BQ6P4H8 233 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 IYDQ6PHW0 289 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 TMCO3Q6UWJ1 677 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 CENPQQ7L2Z9 268 aaPredicted RBP3.37□□□□□ -1.87
CHD8-212ENST00000557329 ISCA2Q86U28 154 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 C17orf82Q86X59 251 aaPredicted RBP3.37□□□□□ -1.87
CHD8-212ENST00000557329 CREBRFQ8IUR6 639 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 CEP57L1Q8IYX8 460 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 SCML4Q8N228 414 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 IQUBQ8NA54 791 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 DDHD1Q8NEL9 900 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 MRGPRDQ8TDS7 321 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 TMEM158Q8WZ71 300 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 ISG20Q96AZ6 181 aaKnown RBP3.37□□□□□ -1.87
CHD8-212ENST00000557329 CXorf40BQ96DE9 158 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 SLC47A1Q96FL8 570 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 ZNF514Q96K75 400 aaPredicted RBP3.37□□□□□ -1.87
CHD8-212ENST00000557329 GPATCH1Q9BRR8 931 aaKnown RBP3.37□□□□□ -1.87
CHD8-212ENST00000557329 TMEM121Q9BTD3 319 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 HGH1Q9BTY7 390 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 UCK2Q9BZX2 261 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 MMP27Q9H306 513 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 KCNK15Q9H427 330 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 CLSTN2Q9H4D0 955 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 ATP13A3Q9H7F0 1226 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 SLC52A3Q9NQ40 469 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 PIGVQ9NUD9 493 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 INTS10Q9NVR2 710 aaKnown RBP3.37□□□□□ -1.87
CHD8-212ENST00000557329 P4HTMQ9NXG6 502 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 FBXO2Q9UK22 296 aaPredicted RBP3.37□□□□□ -1.87
CHD8-212ENST00000557329 SMC3Q9UQE7 1217 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 PRSS21Q9Y6M0 314 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 TACC2O95359 2948 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 NBEAL1Q6ZS30 2694 aa3.37□□□□□ -1.87
CHD8-212ENST00000557329 ABCA4P78363 2273 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 CSPG4Q6UVK1 2322 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 A0A0U1RQS6 177 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 A0A1W2PRB8 838 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 DUXAA6NLW8 204 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 TMEM150CB9EJG8 249 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 GOLGA8SH3BPF8 625 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 MAPK13O15264 365 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 ARHGEF9O43307 516 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 MED7O43513 233 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 KDELR3O43731 214 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 HSF2BPO75031 334 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 PRKRAO75569 313 aaKnown RBP3.36□□□□□ -1.87
CHD8-212ENST00000557329 PALMO75781 387 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 ZMPSTE24O75844 475 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 RSL1D1O76021 490 aaKnown RBP3.36□□□□□ -1.87
CHD8-212ENST00000557329 WISP2O76076 250 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 TSHBP01222 138 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 HOXC4P09017 264 aaPredicted RBP3.36□□□□□ -1.87
CHD8-212ENST00000557329 PAEPP09466 180 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 RAB40ALP0C0E4 278 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 ANKRD34CP0C6C1 535 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 PATE4P0C8F1 98 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 EPB41P11171 864 aaKnown RBP3.36□□□□□ -1.87
CHD8-212ENST00000557329 F3P13726 295 aa3.36□□□□□ -1.87
CHD8-212ENST00000557329 GNB3P16520 340 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms